RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SLC22A17Q8WUG5 538 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 MRPS27Q92552 414 aaKnown RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 CORO2AQ92828 525 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 RFKQ969G6 155 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 MRPL38Q96DV4 380 aaKnown RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 IQCDQ96DY2 449 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 TSPAN17Q96FV3 270 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 SNF8Q96H20 258 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 GDAP1L1Q96MZ0 367 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 PTCHD1Q96NR3 888 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 FCRL4Q96PJ5 515 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 GCNAQ96QF7 691 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 ZFYVE21Q9BQ24 234 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 NAA11Q9BSU3 229 aaPredicted RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 HAUS8Q9BT25 410 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 C9orf16Q9BUW7 83 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 TUBB2BQ9BVA1 445 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 CARD6Q9BX69 1037 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 ZNF341Q9BYN7 854 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 CELF4Q9BZC1 486 aaKnown RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 TTYH3Q9C0H2 523 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 TWSG1Q9GZX9 223 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 QRSL1Q9H0R6 528 aaKnown RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 THAP2Q9H0W7 228 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 TAF1DQ9H5J8 278 aaPredicted RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 ARMT1Q9H993 441 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 MAGEE1Q9HCI5 957 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 TMEM8AQ9HCN3 771 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 LTB4R2Q9NPC1 389 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 DLL4Q9NR61 685 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 LMBRD1Q9NUN5 540 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 WWOXQ9NZC7 414 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 SPASTQ9UBP0 616 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 TRPS1Q9UHF7 1281 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 CORO1CQ9ULV4 474 aaPredicted RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 HSF4Q9ULV5 492 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 CAPN11Q9UMQ6 739 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 RUVBL1Q9Y265 456 aaKnown RBP3.08□□□□□ -1.92
VIM-210ENST00000637053 PHLPP2Q6ZVD8 1323 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 KANK1Q14678 1352 aa3.08□□□□□ -1.92
VIM-210ENST00000637053 SMIM30A4D0T7 59 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 C5orf51A6NDU8 294 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 GLOD5A6NK44 160 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 OR5K4A6NMS3 321 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 AHRRA9YTQ3 701 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 E9PI62 339 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 F8W810 466 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 NOP56O00567 594 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 RASGRF2O14827 1237 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 FGF10O15520 208 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 HTRA2O43464 458 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 MED7O43513 233 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PPP6R2O75170 966 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ZNF821O75541 412 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 PRDM1O75626 825 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ACTL6BO94805 426 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SEC24DO94855 1032 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 ERLIN2O94905 339 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 NDST3O95803 873 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 AK1P00568 194 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CSTAP01040 98 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TGFAP01135 160 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 HLA-DRAP01903 254 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CSF2P04141 144 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PRKCBP05771 671 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 C8BP07358 591 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 KITP10721 976 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 RALBP11234 206 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CYP19A1P11511 503 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 PRPS2P11908 318 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 KRT3P12035 628 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PTPN4P29074 926 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 EPHA8P29322 1005 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 CDC25CP30307 473 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SLC7A1P30825 629 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CHRNA3P32297 505 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PCGF2P35227 344 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 GGT5P36269 586 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PPP1R2P41236 205 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 PAFAH1B1P43034 410 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CBX5P45973 191 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 CRKLP46109 303 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 LMAN1P49257 510 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 POU3F4P49335 361 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 GATMP50440 423 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SLC16A1P53985 500 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 EPHB4P54760 987 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 MLLT6P55198 1093 aaPredicted RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 RIPK4P57078 832 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TAS2R40P59535 323 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TSPAN5P62079 268 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 POLR2GP62487 172 aaKnown RBP eCLIP3.07□□□□□ -1.92
VIM-210ENST00000637053 RPP30P78346 268 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 SMAD3P84022 425 aaKnown RBP3.07□□□□□ -1.92
VIM-210ENST00000637053 GAD2Q05329 585 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 SPIRE1Q08AE8 756 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 TEFQ10587 303 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 MYO1EQ12965 1108 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 XRCC4Q13426 336 aa3.07□□□□□ -1.92
VIM-210ENST00000637053 ADAM9Q13443 819 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms