RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PGBD3Q8N328 593 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 FAM71DQ8N9W8 422 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 LRIG1Q96JA1 1093 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 SEMA3CQ99985 751 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 TMEM121Q9BTD3 319 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 CPEB1Q9BZB8 566 aaKnown RBP16.2■□□□□ 0.18
CLN6-216ENST00000636876 NOD2Q9HC29 1040 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 GLOD4Q9HC38 313 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 KLHL8Q9P2G9 620 aaPredicted RBP16.2■□□□□ 0.18
CLN6-216ENST00000636876 TRHDEQ9UKU6 1024 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 SARDHQ9UL12 918 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 ZNF148Q9UQR1 794 aa16.2■□□□□ 0.18
CLN6-216ENST00000636876 DRG1Q9Y295 367 aaKnown RBP16.2■□□□□ 0.18
CLN6-216ENST00000636876 CCDC163A0A0D9SF12 145 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 GOLGA6L10A0A0M3HER8 536 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 TTC24A2A3L6 582 aaPredicted RBP16.19■□□□□ 0.18
CLN6-216ENST00000636876 AXIN1O15169 862 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 MID1O15344 667 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 DNTTP04053 509 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 ITGAVP06756 1048 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 CES1P23141 567 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 SLC8A1P32418 973 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 PAFAH1B1P43034 410 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 NRLP54845 237 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 DSC2Q02487 901 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 DMWDQ09019 674 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 NIPAL4Q0D2K0 466 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 ANGPT1Q15389 498 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 CYP1B1Q16678 543 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 NCEH1Q6PIU2 408 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 PID1Q7Z2X4 250 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 C12orf50Q8NA57 414 aaPredicted RBP16.19■□□□□ 0.18
CLN6-216ENST00000636876 ARRDC2Q8TBH0 407 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 MAGOHBQ96A72 148 aaKnown RBP16.19■□□□□ 0.18
CLN6-216ENST00000636876 RTP4Q96DX8 246 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 NSMCE3Q96MG7 304 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 TUBGCP5Q96RT8 1024 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 OSBPL1AQ9BXW6 950 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 TPSD1Q9BZJ3 242 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 SLC25A51Q9H1U9 297 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 PABPC3Q9H361 631 aaKnown RBP16.19■□□□□ 0.18
CLN6-216ENST00000636876 ATP13A3Q9H7F0 1226 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 SCML1Q9UN30 329 aa16.19■□□□□ 0.18
CLN6-216ENST00000636876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 C5orf60A6NFR6 353 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 PDE2AO00408 941 aaPredicted RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 KPNA3O00505 521 aaPredicted RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 OPHN1O60890 802 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 PHF2O75151 1096 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 PIGNO95427 931 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 UGT2B4P06133 528 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 ACADMP11310 421 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 C5AR1P21730 350 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 STIP1P31948 543 aaKnown RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 CD68P34810 354 aaPredicted RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 FNTBP49356 437 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 METAP1P53582 386 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 GDF10P55107 478 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 ZNF528Q3MIS6 628 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 TTC31Q49AM3 519 aaPredicted RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 ANKRD20A2Q5SQ80 823 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 ANKRD20A1Q5TYW2 823 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 ANKRD20A3Q5VUR7 823 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 GDPD4Q6W3E5 623 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 WDR5BQ86VZ2 330 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLN6-216ENST00000636876 SPATA13Q96N96 652 aa16.18■□□□□ 0.18
CLN6-216ENST00000636876 FAM126AQ9BYI3 521 aaPredicted RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 USP36Q9P275 1121 aaKnown RBP16.18■□□□□ 0.18
CLN6-216ENST00000636876 GCATO75600 419 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 URI1O94763 535 aaPredicted RBP16.17■□□□□ 0.18
CLN6-216ENST00000636876 MMP2P08253 660 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 SP9P0CG40 484 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 NFKB1P19838 968 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ITGB7P26010 798 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 SERPINA4P29622 427 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 COILP38432 576 aaPredicted RBP16.17■□□□□ 0.18
CLN6-216ENST00000636876 KCNJ1P48048 391 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 BCL2L1Q07817 233 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 IHHQ14623 411 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 POM121L1PQ3SYA9 428 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ZNF805Q5CZA5 627 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ITPRIPL1Q6GPH6 555 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 TTC27Q6P3X3 843 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 CAMK1DQ8IU85 385 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 AADATQ8N5Z0 425 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 KIF18AQ8NI77 898 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 CCDC110Q8TBZ0 833 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 NELL1Q92832 810 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ARRDC3Q96B67 414 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 IMP4Q96G21 291 aaKnown RBP16.17■□□□□ 0.18
CLN6-216ENST00000636876 PPP1R16AQ96I34 528 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ZNF641Q96N77 438 aaPredicted RBP16.17■□□□□ 0.18
CLN6-216ENST00000636876 KLHL32Q96NJ5 620 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 GBA3Q9H227 469 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 SUV39H2Q9H5I1 410 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ITM2CQ9NQX7 267 aa16.17■□□□□ 0.18
CLN6-216ENST00000636876 ANKRD36A6QL64 1941 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms