RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 DUSP4Q13115 394 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 COL9A2Q14055 689 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 HNRNPDQ14103 355 aaKnown RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 MS4A13Q5J8X5 152 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 PCID2Q5JVF3 399 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 FAM182AQ5T1J6 154 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 PIK3R6Q5UE93 754 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 SLC8B1Q6J4K2 584 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 KIAA1841Q6NSI8 718 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 CNKSR3Q6P9H4 555 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 POTEHQ6S545 545 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 RNF19BQ6ZMZ0 732 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 TCEAL8Q8IYN2 117 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 CARNMT1Q8N4J0 409 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 CCDC63Q8NA47 563 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 ZSCAN18Q8TBC5 510 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF669Q96BR6 464 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 MLPHQ9BV36 600 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 SARGQ9BW04 601 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 SLC13A1Q9BZW2 595 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 MTRRQ9UBK8 725 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 EIF2B4Q9UI10 523 aaKnown RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 IPO11Q9UI26 975 aaKnown RBP7.26□□□□□ -1.25
BRCA1-230ENST00000634433 NUDT5Q9UKK9 219 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF232Q9UNY5 417 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 SLC27A5Q9Y2P5 690 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 CAPN7Q9Y6W3 813 aa7.26□□□□□ -1.25
BRCA1-230ENST00000634433 TRIOBPQ9H2D6 2365 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 WDR91A4D1P6 747 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 GLRA3O75311 464 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 RAC2P15153 192 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PAMP19021 973 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 CCL23P55773 120 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 YBEYP58557 167 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MPP3Q13368 585 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MAP7D1Q3KQU3 841 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PARP15Q460N3 678 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 FAM133BQ5BKY9 247 aaKnown RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 RTP2Q5QGT7 225 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 C1orf53Q5VUE5 145 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PDPK2PQ6A1A2 396 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MZT2AQ6P582 158 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 CNTD1Q8N815 330 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF454Q8N9F8 522 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 SCLYQ96I15 445 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 GDF15Q99988 308 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 GORASP1Q9BQQ3 440 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 KIFC1Q9BW19 673 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 TSSK1BQ9BXA7 367 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 SLC7A5P2Q9GIP4 190 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 SLC25A51Q9H1U9 297 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MRM3Q9HC36 420 aaKnown RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PRDM5Q9NQX1 630 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 AFF4Q9UHB7 1163 aaKnown RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 DNMT3LQ9UJW3 386 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 CFAP73A6NFT4 308 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 NT5C1B-RDH14C9J2C7 533 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 UGT1A9O60656 530 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 DNAJC8O75937 253 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 IGLV3-27P01718 113 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MPOP05164 745 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 ITGA2BP08514 1039 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 SOX11P35716 441 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 ATP5C1P36542 298 aaKnown RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 POLD2P49005 469 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MAPKAPK2P49137 400 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 ATN1P54259 1190 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 BMPR2Q13873 1038 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PSMD5Q16401 504 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 UGP2Q16851 508 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 TM4SF20Q53R12 229 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 SPDYAQ5MJ70 313 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 CERCAMQ5T4B2 595 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 RASIP1Q5U651 963 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 SNX30Q5VWJ9 437 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 TPGS2Q68CL5 300 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 OTOAQ7RTW8 1153 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 DEFB128Q7Z7B8 93 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 NUDCD3Q8IVD9 361 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF683Q8IZ20 524 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 STKLD1Q8NE28 680 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 N4BP2L2Q92802 583 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-230ENST00000634433 TUBB6Q9BUF5 446 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 UGT1A7Q9HAW7 530 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 UGT1A10Q9HAW8 530 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 UGT1A8Q9HAW9 530 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PCMTD2Q9NV79 361 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 MPP6Q9NZW5 540 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 CDY1Q9Y6F8 540 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 PLXNA3P51805 1871 aa7.25□□□□□ -1.25
BRCA1-230ENST00000634433 ZCWPW2A0A1B0GU75 182 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 TLR5O60602 858 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 EFCAB14O75071 495 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 USP12O75317 370 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 ERVK-10P10266 1014 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 TYK2P29597 1187 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 SKIV2L2P42285 1042 aaKnown RBP7.24□□□□□ -1.25
BRCA1-230ENST00000634433 PPP3CCP48454 512 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 SLC11A2P49281 568 aa7.24□□□□□ -1.25
BRCA1-230ENST00000634433 HARS2P49590 506 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms