RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 GDPD4Q6W3E5 623 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 RCOR2Q8IZ40 523 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3Q8IZP1 549 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 CHST14Q8NCH0 376 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 EXD1Q8NHP7 514 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 FAM174AQ8TBP5 190 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 SNX19Q92543 992 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 BIRC7Q96CA5 298 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 HDAC11Q96DB2 347 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 C6orf106Q9H6K1 298 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 PARD6AQ9NPB6 346 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 LHX3Q9UBR4 397 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 CDV3Q9UKY7 258 aaKnown RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 SDK1Q7Z5N4 2213 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 USP34Q70CQ2 3546 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 A0A1W2PPC4 97 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 FAM47DPA6NHR8 397 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 LATO43561 262 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 MAFKO60675 156 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 CD48P09326 243 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 CCDC175P0C221 793 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 ADRB3P13945 408 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 CA4P22748 312 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 XPAP23025 273 aaPredicted RBP14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 CTNNA1P35221 906 aaKnown RBP14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 GRIA4P48058 902 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 RACK1P63244 317 aaKnown RBP14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 ELP6Q0PNE2 266 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 OVGP1Q12889 678 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 MMRN1Q13201 1228 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 PDK1Q15118 436 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 CYTH1Q15438 398 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 TFDP3Q5H9I0 405 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 PIP5KL1Q5T9C9 394 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 SLC9A4Q6AI14 798 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 ACRBPQ8NEB7 543 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 RAPGEF5Q92565 580 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 FERMT1Q9BQL6 677 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 MIR1-1HGQ9H1L0 117 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 KLHL11Q9NVR0 708 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 SERGEFQ9UGK8 458 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 EFR3BQ9Y2G0 817 aa14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 REXO2Q9Y3B8 237 aaKnown RBP14.19□□□□□ -0.14
SNRPA1-216ENST00000626000 MTSS1O43312 755 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 MFSD11O43934 449 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 DFNA5O60443 496 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 SOCS5O75159 536 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 UGT2B4P06133 528 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 KRT10P13645 584 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 TGM2P21980 687 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 MMP13P45452 471 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 RPS21P63220 83 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 PPP2R5EQ16537 467 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 TAZQ16635 292 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 ATP13A4Q4VNC1 1196 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 ATXN7L2Q5T6C5 722 aaPredicted RBP14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 LEKR1Q6ZMV7 388 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 ZNF662Q6ZS27 426 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 SRLQ86TD4 932 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 LRRC8AQ8IWT6 810 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 UBL4BQ8N7F7 174 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 PAF1Q8N7H5 531 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 FEM1CQ96JP0 617 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 EDEM2Q9BV94 578 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 C1QTNF7Q9BXJ2 289 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 POLR1EQ9GZS1 481 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 CAPN10Q9HC96 672 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 TMEM9BQ9NQ34 198 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 ETNK2Q9NVF9 386 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 EIF2B4Q9UI10 523 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 PCDHA3Q9Y5H8 950 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 PI4KAP42356 2102 aa14.18□□□□□ -0.14
SNRPA1-216ENST00000626000 CACNA1EQ15878 2313 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 LNP1A1A4G5 178 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 TSPAN11A1L157 253 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 C3orf70A6NLC5 250 aaPredicted RBP14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 C16orf96A6NNT2 1141 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 C10orf142B7Z368 130 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 PRAMEF26H0Y7S4 382 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 NEMP1O14524 444 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 MATN3O15232 486 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 CER1O95813 267 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 IGHV4-34P06331 123 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 CTNNA2P26232 953 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 CDKN2BP42772 138 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 RWDD2BP57060 319 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 BCL2L1Q07817 233 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 NAPEPLDQ6IQ20 393 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 SPOCD1Q6ZMY3 1216 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 PEX26Q7Z412 305 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 ADAT2Q7Z6V5 191 aaKnown RBP14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 IQCHQ86VS3 1027 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 HORMAD1Q86X24 394 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 RFX6Q8HWS3 928 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 CCDC50Q8IVM0 306 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 NDUFAF2Q8N183 169 aa14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 ZCCHC9Q8N567 271 aaKnown RBP14.17□□□□□ -0.14
SNRPA1-216ENST00000626000 DEFB119Q8N690 84 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms