RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PTP4A2Q12974 167 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ELAVL3Q14576 367 aaKnown RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 NFKBIBQ15653 356 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 DLG2Q15700 870 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ALFQ53S48 1182 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 FIGNQ5HY92 759 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 PEAR1Q5VY43 1037 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 TRNP1Q6NT89 227 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 RETSATQ6NUM9 610 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ZNF783Q6ZMS7 281 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 BNIPLQ7Z465 357 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ZNF354CQ86Y25 554 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 DRC7Q8IY82 874 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ZCCHC9Q8N567 271 aaKnown RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 CENPIQ92674 756 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 PTPRN2Q92932 1015 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 SKA1Q96BD8 255 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D31Q96DN5 1066 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 CNPY3Q9BT09 278 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 SLC32A1Q9H598 525 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 C6orf106Q9H6K1 298 aaPredicted RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 RETREG1Q9H6L5 497 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 C7orf69Q9H7B7 122 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ATP13A1Q9HD20 1204 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 ANLNQ9NQW6 1124 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 DYRK4Q9NR20 520 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 RXFP3Q9NSD7 469 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 PCMTD2Q9NV79 361 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 AIPL1Q9NZN9 384 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 EIF2B4Q9UI10 523 aaKnown RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 HPCAL4Q9UM19 191 aa6.54□□□□□ -1.36
TCF4-249ENST00000625716 LUC7L2Q9Y383 392 aaKnown RBP6.54□□□□□ -1.36
TCF4-249ENST00000625716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.54□□□□□ -1.36
TCF4-249ENST00000625716 FAM186AA6NE01 2351 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 IGLV3-10A0A075B6K4 115 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3DA0A087WVF3 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3IA0A087WXS9 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3EA0A087X179 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3KA0A087X1G2 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 A0A0D9SEW6 157 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 A0A1W2PP55 124 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 HMX2A2RU54 273 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3FA6NER0 549 aaPredicted RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3LB9A6J9 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 H3BRJ5 948 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 MCF2LO15068 1137 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 ALOX15BO15296 676 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 DAPK3O43293 454 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CCP110O43303 1012 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CREB3O43889 395 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 RNF8O76064 485 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TPM1P09493 284 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3HP0C7X1 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 MYBL1P10243 752 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 SKILP12757 684 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 SRCP12931 536 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CES1P23141 567 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 RRM1P23921 792 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 MPSTP25325 297 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 PSMA2P25787 234 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 EPHB2P29323 1055 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 PRKCIP41743 596 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 EIF1AXP47813 144 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 MAPKAPK2P49137 400 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 DNA2P51530 1060 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 AIF1P55008 147 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 HDAC4P56524 1084 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 C21orf59P57076 290 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 GEMIN4P57678 1058 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 ZBED6P86452 979 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 GNA12Q03113 381 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 KIAA0895LQ68EN5 471 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3GQ6DHY5 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3CQ6IPX1 549 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 IL27RAQ6UWB1 636 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 ZNF571Q7Z3V5 609 aaPredicted RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 TMC6Q7Z403 805 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 ADAT2Q7Z6V5 191 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 ZNF683Q8IZ20 524 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TBC1D3Q8IZP1 549 aaPredicted RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 SH2D3CQ8N5H7 860 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CCDC185Q8N715 623 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 DCAF4L2Q8NA75 395 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 OR7D4Q8NG98 312 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 OR2T34Q8NGX1 318 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 OR14C36Q8NHC7 312 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 PIP4K2CQ8TBX8 421 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 DNASE2BQ8WZ79 361 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 SYN2Q92777 582 aaPredicted RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 UTP4Q969X6 686 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 NTAN1Q96AB6 310 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 BIRC7Q96CA5 298 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 ZNF653Q96CK0 615 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 ALG14Q96F25 216 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms