RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SLC39A5Q6ZMH5 540 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 PDZD8Q8NEN9 1154 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 RDH11Q8TC12 318 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 SREK1Q8WXA9 508 aaKnown RBP19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 OVCA2Q8WZ82 227 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 MIPEPQ99797 713 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 EBF4Q9BQW3 602 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 PCDHB12Q9Y5F1 795 aa19.93■□□□□ 0.78
PCDHB11-202ENST00000624887 ACSL4O60488 711 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 PRAMEF11O60813 436 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 H2AFYO75367 372 aaKnown RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 WFS1O76024 890 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 PAPSS2O95340 614 aaPredicted RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 SERPINA6P08185 405 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 ESRRAP11474 423 aaPredicted RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 RPL17P18621 184 aaKnown RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 TSTD2Q5T7W7 516 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF470Q6ECI4 717 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 NEPROQ6NW34 567 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 KIAA0408Q6ZU52 694 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 DEFB128Q7Z7B8 93 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC41A1Q8IVJ1 513 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 LGI2Q8N0V4 545 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 RILPQ96NA2 401 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 VN1R3Q9BXE9 311 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 RETREG1Q9H6L5 497 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 FBXO5Q9UKT4 447 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 FAM95CA0A1B0GW59 222 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 PHGDHO43175 533 aaKnown RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 TRIM13O60858 407 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 ALOX15P16050 662 aaPredicted RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 SAT1P21673 171 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 RAB10P61026 200 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 TMCO4Q5TGY1 634 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 MFSD6LQ8IWD5 586 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 TMEM151AQ8N4L1 468 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 FAM13CQ8NE31 585 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 AGAP11Q8TF27 550 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 IGSF21Q96ID5 467 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF333Q96JL9 665 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF512Q96ME7 567 aaPredicted RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 TSNARE1Q96NA8 513 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 ACE2Q9BYF1 805 aaPredicted RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 PPP1R12CQ9BZL4 782 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 TASP1Q9H6P5 420 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 CWH43Q9H720 699 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 PNPOQ9NVS9 261 aa19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 UXTQ9UBK9 157 aaPredicted RBP19.92■□□□□ 0.78
PCDHB11-202ENST00000624887 CHD5Q8TDI0 1954 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 LOC285095A0A1B0GVY8 99 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 TMEM114B3SHH9 223 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 UPP2O95045 317 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 CD151P48509 253 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 TUBB3Q13509 450 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 TBCCQ15814 346 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 KLHDC10Q6PID8 442 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 CALML6Q8TD86 181 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 CADM1Q9BY67 442 aaKnown RBP19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 POLR1EQ9GZS1 481 aaKnown RBP19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 PDFQ9HBH1 243 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 OXSMQ9NWU1 459 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 DNAJC28Q9NX36 388 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 AFF4Q9UHB7 1163 aaKnown RBP19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 RPL26L1Q9UNX3 145 aaKnown RBP19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 SORCS3Q9UPU3 1222 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 ACOT9Q9Y305 439 aa19.91■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF840PA6NDX5 716 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 STMN1P16949 149 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CCND1P24385 295 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CRABP2P29373 138 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC6A4P31645 630 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 ETFBP38117 255 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 ZYG11AQ6WRX3 759 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 NAPRTQ6XQN6 538 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 TREML1Q86YW5 311 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CENPLQ8N0S6 344 aaPredicted RBP19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CFAP52Q8N1V2 620 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 GABPB2Q8TAK5 448 aaPredicted RBP19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF599Q96NL3 588 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CCDC106Q9BWC9 280 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CPSF2Q9P2I0 782 aaKnown RBP19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 BPTFQ12830 3046 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 TTC24A2A3L6 582 aaPredicted RBP19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 MROH6A6NGR9 719 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 ZNF195O14628 629 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 GYG2O15488 501 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 AVPR1AP37288 418 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 SLC11A2P49281 568 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 SIRPB2Q5JXA9 342 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 HECTD3Q5T447 861 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 RFWD3Q6PCD5 774 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 FBXO46Q6PJ61 603 aaPredicted RBP19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 MAVSQ7Z434 540 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CEP97Q8IW35 865 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 OR13J1Q8NGT2 312 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 KCTD4Q8WVF5 259 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 CLSTN3Q9BQT9 956 aa19.9■□□□□ 0.78
PCDHB11-202ENST00000624887 NACA2Q9H009 215 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms