RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 MAP4K3Q8IVH8 894 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 CLYBLQ8N0X4 340 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 PPP3R2Q96LZ3 170 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 NODALQ96S42 347 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 MUC3BQ9H195 1237 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 UGT1A7Q9HAW7 530 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 UGT1A10Q9HAW8 530 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 UGT1A8Q9HAW9 530 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 IFT80Q9P2H3 777 aaPredicted RBP8.99□□□□□ -0.97
VCL-206ENST00000623461 MON2Q7Z3U7 1717 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 DIP2CQ9Y2E4 1556 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 RNASEH1O60930 286 aaKnown RBP8.99□□□□□ -0.97
VCL-206ENST00000623461 ICAM1P05362 532 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ADRA2BP18089 450 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 HSF2Q03933 536 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ARHGEF7Q14155 803 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 EFCAB12Q6NXP0 572 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 CES3Q6UWW8 571 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ZBTB46Q86UZ6 589 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 SLC41A1Q8IVJ1 513 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ROPN1LQ96C74 230 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ADI1Q9BV57 179 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 UBP1Q9NZI7 540 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 TULP3O75386 442 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 S100A6P06703 90 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 SLC6A3Q01959 620 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 SVOPLQ8N434 492 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 UBR7Q8N806 425 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 OR8H1Q8NGG4 311 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 FCGR1BQ92637 280 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 TBCDQ9BTW9 1192 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ANKHQ9HCJ1 492 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 C12orf4Q9NQ89 552 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 ZDHHC18Q9NUE0 388 aa8.99□□□□□ -0.97
VCL-206ENST00000623461 AKAP7Q9P0M2 348 aaPredicted RBP8.99□□□□□ -0.97
VCL-206ENST00000623461 IDH2P48735 452 aaKnown RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 SEPHS1P49903 392 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PPP3CAQ08209 521 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 OTOP1Q7RTM1 612 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 UNC5BQ8IZJ1 945 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 B3GALNT2Q8NCR0 500 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 AGO4Q9HCK5 861 aaKnown RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 TCHHQ07283 1943 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 DPYSL4O14531 572 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 NDUFS2O75306 463 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TPH1P17752 444 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ATP12AP54707 1039 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PRKG2Q13237 762 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 LCN1P1Q5VSP4 162 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 DCP1BQ8IZD4 617 aaKnown RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 KLHL28Q9NXS3 571 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PCDHGA3Q9Y5H0 932 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 FAM240BA0A1B0GVZ2 78 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 MTA2O94776 668 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 SDC2P34741 201 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 CACNB2Q08289 660 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 PPM1LQ5SGD2 360 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 CDK20Q8IZL9 346 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 BANPQ8N9N5 519 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 COQ10BQ9H8M1 238 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 KLHL1Q9NR64 748 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 C2orf71A6NGG8 1288 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TRIM64CA6NLI5 447 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PSMD11O00231 422 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 FOXN2P32314 431 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ZNF143P52747 638 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 MAPKAPK3Q16644 382 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 IL27RAQ6UWB1 636 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 C1orf186Q6ZWK4 172 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 SAPCD2Q86UD0 394 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 C11orf74Q86VG3 221 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ADGRE3Q9BY15 652 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 RBM22Q9NW64 420 aaKnown RBP eCLIP8.98□□□□□ -0.975e-7■■■■□ 25.8
VCL-206ENST00000623461 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PNMA8BQ9ULN7 279 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 PDE10AQ9Y233 779 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 YES1P07947 543 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 CHRM1P11229 460 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 ITGALP20701 1170 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 HPCAL1P37235 193 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 SMIM11AP58511 58 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 ELP6Q0PNE2 266 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 SPP2Q13103 211 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TXNDC11Q6PKC3 985 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 USP43Q70EL4 1123 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 CBR4Q8N4T8 237 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 LRTOMTQ8WZ04 291 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 PMF1-BGLAPU3KQ54 211 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 FAM92AA1XBS5 289 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 SLC28A1O00337 649 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 TFECO14948 347 aaPredicted RBP8.98□□□□□ -0.97
VCL-206ENST00000623461 ITIH1P19827 911 aa8.98□□□□□ -0.97
VCL-206ENST00000623461 RARRES1P49788 294 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms