RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 POLR3BQ9NW08 1133 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-216ENST00000623185 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
LINC00963-216ENST00000623185 KLHL8Q9P2G9 620 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-216ENST00000623185 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
LINC00963-216ENST00000623185 EVLQ9UI08 416 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-216ENST00000623185 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
LINC00963-216ENST00000623185 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
LINC00963-216ENST00000623185 NCOR1O75376 2440 aa12.62□□□□□ -0.39
LINC00963-216ENST00000623185 MIA3Q5JRA6 1907 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 TCRBV21S2A2A0A5A6 115 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 C1QTNF3-AMACRE9PGA6 284 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 DLL1O00548 723 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 LEFTY1O75610 366 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 ADH1BP00325 375 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 CTSLP07711 333 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 SERPINF2P08697 491 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 SLC8A1P32418 973 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 NRLP54845 237 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 GDF10P55107 478 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 MAXP61244 160 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 POLR2LP62875 67 aaKnown RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 BCL2L1Q07817 233 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 NIPAL4Q0D2K0 466 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 CST6Q15828 149 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 ZNF805Q5CZA5 627 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 TTC27Q6P3X3 843 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 USP30Q70CQ3 517 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 GSTA5Q7RTV2 222 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 RYBPQ8N488 228 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 PIP4K2CQ8TBX8 421 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 GRK7Q8WTQ7 553 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 FAM126AQ9BYI3 521 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 ATP13A3Q9H7F0 1226 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 PRMT8Q9NR22 394 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 VPS45Q9NRW7 570 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 DKK3Q9UBP4 350 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
LINC00963-216ENST00000623185 AAR2Q9Y312 384 aaKnown RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-216ENST00000623185 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 TRAFD1O14545 582 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-216ENST00000623185 PSMD3O43242 534 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 HTRA2O43464 458 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-216ENST00000623185 SOCS5O75159 536 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 ZNF217O75362 1048 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 ANXA9O76027 345 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 IL1BP01584 269 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 EPOP01588 193 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 DNTTP04053 509 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 MMP2P08253 660 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 SERPINA4P29622 427 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 DSC2Q02487 901 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 PRPSAP1Q14558 356 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 ZNF528Q3MIS6 628 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 PRPF39Q86UA1 669 aaKnown RBP12.6□□□□□ -0.39
LINC00963-216ENST00000623185 CAMK1DQ8IU85 385 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 KLHDC8BQ8IXV7 354 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-216ENST00000623185 CCDC89Q8N998 374 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 CCDC110Q8TBZ0 833 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 PPP1R16AQ96I34 528 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 EXOC2Q96KP1 924 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 NSMCE3Q96MG7 304 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 HDAC8Q9BY41 377 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 ZDHHC6Q9H6R6 413 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 PAK5Q9P286 719 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 FAM153AQ9UHL3 310 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 NEU2Q9Y3R4 380 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 MRFAP1Q9Y605 127 aa12.6□□□□□ -0.39
LINC00963-216ENST00000623185 MYO18AQ92614 2054 aaKnown RBP12.6□□□□□ -0.39
LINC00963-216ENST00000623185 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 FZD6O60353 706 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 IFNB1P01574 187 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 ACADMP11310 421 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 TDGF1P13385 188 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 NDUFV2P19404 249 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 CA4P22748 312 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 ITGB7P26010 798 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 GKP32189 559 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 RPL22P35268 128 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 SUOXP51687 545 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 RPL26P61254 145 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 SKOR1P84550 965 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 MPP3Q13368 585 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 IHHQ14623 411 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 BRAT1Q6PJG6 821 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 ARHGEF18Q6ZSZ5 1173 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 SYDE1Q6ZW31 735 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 PGBD3Q8N328 593 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 MNS1Q8NEH6 495 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 MDGA1Q8NFP4 955 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 OR6K2Q8NGY2 324 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms