RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ACTN3Q08043 901 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 OLIG2Q13516 323 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 LILRA6Q6PI73 481 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 OTOP2Q7RTS6 562 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 ZC3HC1Q86WB0 502 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 UNC5BQ8IZJ1 945 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 C2CD4AQ8NCU7 369 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 ARMC2Q8NEN0 867 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 PPP1R14CQ8TAE6 165 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 TSPAN17Q96FV3 270 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 LRRC37BQ96QE4 947 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 RNF38Q9H0F5 515 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 STN1Q9H668 368 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 DPP7Q9UHL4 492 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 PSAT1Q9Y617 370 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 KIAA1671Q9BY89 1806 aa16.52■□□□□ 0.24
LDB3-208ENST00000623007 TRAV19A0A0A6YYK7 116 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 TGM5O43548 720 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 PLIN3O60664 434 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 VAPBO95292 243 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 NDST3O95803 873 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 KLKB1P03952 638 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 MMP2P08253 660 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 ACVRL1P37023 503 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 ARCN1P48444 511 aaKnown RBP16.52■□□□□ 0.23
LDB3-208ENST00000623007 POU4F1Q01851 419 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 DSC2Q02487 901 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 ASPHQ12797 758 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 SLC12A1Q13621 1099 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 PCSK7Q16549 785 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 TSNAXIP1Q2TAA8 658 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 FAM182AQ5T1J6 154 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 RFWD3Q6PCD5 774 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 ELMSAN1Q6PJG2 1045 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 CDHR3Q6ZTQ4 885 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 TMC7Q7Z402 723 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 CRLF3Q8IUI8 442 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 BRSK1Q8TDC3 778 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 PRICKLE1Q96MT3 831 aaPredicted RBP16.52■□□□□ 0.23
LDB3-208ENST00000623007 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.52■□□□□ 0.23
LDB3-208ENST00000623007 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.23
LDB3-208ENST00000623007 ANAPC1Q9H1A4 1944 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 A0A096LPK6 155 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 WDR91A4D1P6 747 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 MROH6A6NGR9 719 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 H0YHG0 523 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CXCL14O95715 111 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CRTAMO95727 393 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CNPP09543 421 aaKnown RBP16.51■□□□□ 0.23
LDB3-208ENST00000623007 ACRP10323 421 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 MAPK8P45983 427 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CD151P48509 253 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 RASSF2P50749 326 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CLCN5P51795 746 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 STX3Q13277 289 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 SEPT6Q14141 434 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 N4BP2L1Q5TBK1 243 aaPredicted RBP16.51■□□□□ 0.23
LDB3-208ENST00000623007 NEPROQ6NW34 567 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 Q6ZNB5 142 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 HTR3DQ70Z44 454 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 CIR1Q86X95 450 aaPredicted RBP16.51■□□□□ 0.23
LDB3-208ENST00000623007 CFAP52Q8N1V2 620 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 TMA16Q96EY4 203 aaKnown RBP16.51■□□□□ 0.23
LDB3-208ENST00000623007 SPON2Q9BUD6 331 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 ADGRE3Q9BY15 652 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 MFSD1Q9H3U5 465 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 IL21Q9HBE4 155 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 TRPC7Q9HCX4 862 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 SH3BP1Q9Y3L3 701 aa16.51■□□□□ 0.23
LDB3-208ENST00000623007 DNAH12Q6ZR08 3092 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 A0A087X1B8 175 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 C2orf78A6NCI8 922 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 H0Y626 953 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 PFDN6O15212 129 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 INSIG1O15503 277 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 DNAJC8O75937 253 aaPredicted RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 LUC7L3O95232 432 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 GLUD1P00367 558 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 HOXA9P31269 272 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 HK2P52789 917 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 SLC12A2P55011 1212 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 RPS24P62847 133 aaKnown RBP16.5■□□□□ 0.23
LDB3-208ENST00000623007 PRAMEP78395 509 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 ACVR1Q04771 509 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 SIRPB2Q5JXA9 342 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 CGB2Q6NT52 195 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 TMEM150AQ86TG1 271 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 PPP4R1Q8TF05 950 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 STYXQ8WUJ0 223 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 ACDQ96AP0 544 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 NUDCD1Q96RS6 583 aa16.5■□□□□ 0.23
LDB3-208ENST00000623007 AGAP2Q99490 1192 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms