RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 KATNAL2Q8IYT4 538 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 DNAJC5GQ8N7S2 189 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 FBXO36Q8NEA4 188 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 XYLT2Q9H1B5 865 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 A0A1W2PP55 124 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 A0A1W2PQ67 120 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 C2CD4BA6NLJ0 364 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 KITP10721 976 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CYP2A7P20853 494 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CRADDP78560 199 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 SLC44A4Q53GD3 710 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 ATG16L1Q676U5 607 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 BEND7Q8N7W2 519 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 RLN3Q8WXF3 142 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 THOC1Q96FV9 657 aaKnown RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 ZBP1Q9H171 429 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 ACTR8Q9H981 624 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PNPLA8Q9NP80 782 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 GIMAP4Q9NUV9 329 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 TAS2R13Q9NYV9 303 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 PLAAQ9Y263 795 aa9.18□□□□□ -0.94
HDAC9-229ENST00000622668 MFSD11O43934 449 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 TTC4O95801 387 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ARSAP15289 507 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PRLRP16471 622 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 HOXD13P35453 343 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 INCA1Q0VD86 236 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 LRRC38Q5VT99 294 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 NEPROQ6NW34 567 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 AADACL2Q6P093 401 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SRLQ86TD4 932 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 WDR75Q8IWA0 830 aaKnown RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 STK40Q8N2I9 435 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 RPLP0P6Q8NHW5 317 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 LRRC15Q8TF66 581 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SLC35F5Q8WV83 523 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 KLHDC7BQ96G42 594 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CABS1Q96KC9 395 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PPP1R36Q96LQ0 422 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 FERD3LQ96RJ6 166 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 RHBGQ9H310 441 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PNMA8BQ9ULN7 279 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 M0QZQ0 153 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 AXIN1O15169 862 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SH3BGRLO75368 114 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SPAG7O75391 227 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SPAG6O75602 509 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SUPT7LO94864 414 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PAK4O96013 591 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 BRAFP15056 766 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 MARCKSL1P49006 195 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 USP46P62068 366 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CSHL1Q14406 222 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SLC8B1Q6J4K2 584 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CNSTQ6PJW8 725 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 TMEM110Q86TL2 294 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PARGQ86W56 976 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CRLF3Q8IUI8 442 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 KCTD13Q8WZ19 329 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 KCTD15Q96SI1 283 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SLC4A5Q9BY07 1137 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 NLNQ9BYT8 704 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SMOC2Q9H3U7 446 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 GLOD4Q9HC38 313 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 DNMT3BQ9UBC3 853 aaKnown RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 YBX2Q9Y2T7 364 aaKnown RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 OR2AG2A6NM03 316 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 B4DGG1 531 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PJA2O43164 708 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CXCL10P02778 98 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 FGF1P05230 155 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ZSCAN5DPP0CG00 497 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ALOX15P16050 662 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 HLA-DPA1P20036 260 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CD151P48509 253 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SERPINB9P50453 376 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ABRQ12979 859 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 PITRM1Q5JRX3 1037 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 TANGO2Q6ICL3 276 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ESRP1Q6NXG1 681 aaKnown RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ZNF438Q7Z4V0 828 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 OR2AP1Q8NGE2 309 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ZNF398Q8TD17 642 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 OVCA2Q8WZ82 227 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ARHGEF2Q92974 986 aaKnown RBP9.17□□□□□ -0.94
HDAC9-229ENST00000622668 SLC46A2Q9BY10 475 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CHST7Q9NS84 486 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CATSPERZQ9NTU4 200 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CITO14578 2027 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 RPIAP49247 311 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 BTKQ06187 659 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 ENPEPQ07075 957 aa9.17□□□□□ -0.94
HDAC9-229ENST00000622668 CAPRIN1Q14444 709 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms