RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 HLA-DQB2P05538 268 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 UGT2B4P06133 528 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 ITGB7P26010 798 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 OXTRP30559 389 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 IFI35P80217 286 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-217ENST00000621474 ZNF235Q14590 738 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 NOMO1Q15155 1222 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 SLC36A4Q6YBV0 504 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 PARS2Q7L3T8 475 aaKnown RBP14.49□□□□□ -0.09
CBWD3-217ENST00000621474 C11orf74Q86VG3 221 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 ZSWIM9Q86XI8 627 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 CNTD1Q8N815 330 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 ACTL9Q8TC94 416 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 UBE2Q2Q8WVN8 375 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 IL12RB2Q99665 862 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 GPR174Q9BXC1 333 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 C6orf106Q9H6K1 298 aaPredicted RBP14.49□□□□□ -0.09
CBWD3-217ENST00000621474 TRAFD1O14545 582 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 PPP1R12AO14974 1030 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 PLRG1O43660 514 aaKnown RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SCNN1BP51168 640 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 RENBPP51606 427 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 OTUD4Q01804 1114 aaKnown RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 AP1B1Q10567 949 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 RPS6KA1Q15418 735 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ZNF805Q5CZA5 627 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 NCEH1Q6PIU2 408 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 GDPD4Q6W3E5 623 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SRLQ86TD4 932 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ZC3H18Q86VM9 953 aaKnown RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 CAMK1DQ8IU85 385 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 KLHL32Q96NJ5 620 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 NUDCD1Q96RS6 583 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 FAM118BQ9BPY3 351 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 HDAC8Q9BY41 377 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 CEP41Q9BYV8 373 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 CARD9Q9H257 536 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SGK2Q9HBY8 427 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 NOD2Q9HC29 1040 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 NT5MQ9NPB1 228 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 RBM22Q9NW64 420 aaKnown RBP eCLIP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ATP8A1Q9Y2Q0 1164 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 CFAP54Q96N23 3096 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 CACNA1EQ15878 2313 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 TSPAN11A1L157 253 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 C16orf96A6NNT2 1141 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ENC1O14682 589 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SLC7A4O43246 635 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 TJP3O95049 919 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SEMA4FO95754 770 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ADRB3P13945 408 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 HSPA9P38646 679 aaKnown RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SPDYCQ5MJ68 293 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ERN2Q76MJ5 926 aaKnown RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ARMCX6Q7L4S7 300 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 LPCAT2Q7L5N7 544 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SLC35F6Q8N357 371 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 CADM4Q8NFZ8 388 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ARRDC2Q8TBH0 407 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 NSMCE1Q8WV22 266 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ECHDC3Q96DC8 303 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 HSPA12BQ96MM6 686 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 QKIQ96PU8 341 aaKnown RBP eCLIP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 TUBGCP5Q96RT8 1024 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 ORAI3Q9BRQ5 295 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 OSBPL1AQ9BXW6 950 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 BRD8Q9H0E9 1235 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 C10orf88Q9H8K7 445 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 AMACRQ9UHK6 382 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 NCKAP1Q9Y2A7 1128 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 R3HDM2Q9Y2K5 976 aaKnown RBP14.48□□□□□ -0.09
CBWD3-217ENST00000621474 SLCO1B1Q9Y6L6 691 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 GVINP1Q7Z2Y8 2422 aa14.48□□□□□ -0.09
CBWD3-217ENST00000621474 KCNK3O14649 394 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 MAP3K13O43283 966 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 JCHAINP01591 159 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 IGHV4-34P06331 123 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 ABL2P42684 1182 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 NEK3P51956 506 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 AP1S1P61966 158 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 PPP2CBP62714 309 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 PPP2CAP67775 309 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 WASHC5Q12768 1159 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 ELF2Q15723 593 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 LAIR1Q6GTX8 287 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 BZW1Q7L1Q6 419 aaKnown RBP14.47□□□□□ -0.09
CBWD3-217ENST00000621474 OR14C36Q8NHC7 312 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 GANCQ8TET4 914 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 TFB1MQ8WVM0 346 aaKnown RBP14.47□□□□□ -0.09
CBWD3-217ENST00000621474 BIRC7Q96CA5 298 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 PPP1R16AQ96I34 528 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 POLR1EQ9GZS1 481 aaKnown RBP14.47□□□□□ -0.09
CBWD3-217ENST00000621474 SUV39H2Q9H5I1 410 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 EBF2Q9HAK2 575 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 TMEM74BQ9NUR3 256 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 GGT7Q9UJ14 662 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.47□□□□□ -0.09
CBWD3-217ENST00000621474 JRKLQ9Y4A0 524 aa14.47□□□□□ -0.09
CBWD3-217ENST00000621474 FAM47DPA6NHR8 397 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms