RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 HMCESQ96FZ2 354 aa24.36■■□□□ 1.49
ATXN3-253ENST00000621269 LENG8Q96PV6 779 aaPredicted RBP24.36■■□□□ 1.49
ATXN3-253ENST00000621269 C1QTNF2Q9BXJ5 285 aa24.36■■□□□ 1.49
ATXN3-253ENST00000621269 TTYH3Q9C0H2 523 aa24.36■■□□□ 1.49
ATXN3-253ENST00000621269 DONSONQ9NYP3 566 aa24.36■■□□□ 1.49
ATXN3-253ENST00000621269 TAS2R14Q9NYV8 317 aa24.36■■□□□ 1.49
ATXN3-253ENST00000621269 GPSM3Q9Y4H4 160 aa24.36■■□□□ 1.49
ATXN3-253ENST00000621269 NEMP2A6NFY4 417 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 WASH4PA8MWX3 477 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 RAD51BO15315 384 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 PIAS2O75928 621 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 RABIFP47224 123 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 TARDBPQ13148 414 aaKnown RBP eCLIP24.35■■□□□ 1.49
ATXN3-253ENST00000621269 SERINC3Q13530 473 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 ZNF542PQ5EBM4 170 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 C19orf48Q6RUI8 117 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 UMODL1-AS1Q8N2C9 162 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 ASB12Q8WXK4 309 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 BAP1Q92560 729 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 ITM2BQ9Y287 266 aa24.35■■□□□ 1.49
ATXN3-253ENST00000621269 LRRC53A6NM62 1247 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 PSMA2P25787 234 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 HTR7P34969 479 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 TPI1P60174 286 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 HNRNPKP61978 463 aaKnown RBP eCLIP24.34■■□□□ 1.49
ATXN3-253ENST00000621269 OGDHQ02218 1023 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 MAMLD1Q13495 774 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 ASIC2Q16515 512 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 NXPE2Q96DL1 559 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 SYT11Q9BT88 431 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 KLC2Q9H0B6 622 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 GGT7Q9UJ14 662 aa24.34■■□□□ 1.49
ATXN3-253ENST00000621269 SPTY2D1-AS1A0A0U1RR47 76 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 E2F1Q01094 437 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 FZD2Q14332 565 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 PARGQ86W56 976 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 NETO2Q8NC67 525 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 DENND6BQ8NEG7 585 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 KLF6Q99612 283 aaPredicted RBP24.33■■□□□ 1.49
ATXN3-253ENST00000621269 NCAPGQ9BPX3 1015 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 GPR27Q9NS67 375 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 NLGN3Q9NZ94 848 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 MFHAS1Q9Y4C4 1052 aa24.33■■□□□ 1.49
ATXN3-253ENST00000621269 DOCK9Q9BZ29 2069 aa24.33■■□□□ 1.48
ATXN3-253ENST00000621269 H3BM21 787 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 PDE1CQ14123 709 aaPredicted RBP24.32■■□□□ 1.48
ATXN3-253ENST00000621269 PLEKHA7Q6IQ23 1121 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 CXorf40AQ8TE69 158 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 HNRNPLLQ8WVV9 542 aaKnown RBP24.32■■□□□ 1.48
ATXN3-253ENST00000621269 VOPP1Q96AW1 172 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 DUSP23Q9BVJ7 150 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 HAUS4Q9H6D7 363 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 UBA2Q9UBT2 640 aaPredicted RBP24.32■■□□□ 1.48
ATXN3-253ENST00000621269 AP4E1Q9UPM8 1137 aa24.32■■□□□ 1.48
ATXN3-253ENST00000621269 EIF3CLB5ME19 914 aaKnown RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 EEF2KO00418 725 aaKnown RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 AREL1O15033 823 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 SCAMP1O15126 338 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 ATMINO43313 823 aaPredicted RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 CSF2P04141 144 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 XPAP23025 273 aaPredicted RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 ZNF165P49910 485 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 LRRC73Q5JTD7 316 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 RFFLQ8WZ73 363 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 EIF3CQ99613 913 aaKnown RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 C1QTNF7Q9BXJ2 289 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 CPEB1Q9BZB8 566 aaKnown RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 DHX35Q9H5Z1 703 aaKnown RBP24.31■■□□□ 1.48
ATXN3-253ENST00000621269 EVA1BQ9NVM1 165 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 GPATCH2LQ9NWQ4 482 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 DKK3Q9UBP4 350 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 CLCA2Q9UQC9 943 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 AK5Q9Y6K8 562 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 CHD5Q8TDI0 1954 aa24.31■■□□□ 1.48
ATXN3-253ENST00000621269 A0A1W2PQC6 194 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 SPINT1O43278 529 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 DAPK3O43293 454 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 MMP20O60882 483 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 TM7SF2O76062 418 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 RNF8O76064 485 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 FTLP02792 175 aaPredicted RBP24.3■■□□□ 1.48
ATXN3-253ENST00000621269 CKMT1AP12532 417 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 NME1P15531 152 aaKnown RBP24.3■■□□□ 1.48
ATXN3-253ENST00000621269 NDST2P52849 883 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 INSM1Q01101 510 aaPredicted RBP24.3■■□□□ 1.48
ATXN3-253ENST00000621269 PTK2BQ14289 1009 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 CYTH1Q15438 398 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 COL28A1Q2UY09 1125 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 ERMARDQ5T6L9 678 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 CAVIN1Q6NZI2 390 aaKnown RBP24.3■■□□□ 1.48
ATXN3-253ENST00000621269 CACTIN-AS1Q8N1I8 211 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 EXOC2Q96KP1 924 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 APOLD1Q96LR9 279 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 NRSN2Q9GZP1 204 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 LRRC19Q9H756 370 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 CAAP1Q9H8G2 361 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 SCUBE2Q9NQ36 999 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 AIPL1Q9NZN9 384 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 PCSK1NQ9UHG2 260 aa24.3■■□□□ 1.48
ATXN3-253ENST00000621269 TMEM191CA6NGB0 347 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms