RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 KHNYNO15037 678 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MAP3K13O43283 966 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 RASA4O43374 803 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MFSD11O43934 449 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 RNGTTO60942 597 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PALMO75781 387 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 KIAA0754O94854 1291 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MAP3K6O95382 1288 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 FTCDO95954 541 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PEX11BO96011 259 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ADH1BP00325 375 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 RHOCP08134 193 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SYPP08247 313 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MYZAPP0CAP1 466 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SRCP12931 536 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CTNNA2P26232 953 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CDKN2BP42772 138 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SSR1P43307 286 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ID4P47928 161 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 HCAR3P49019 387 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MAPKAPK2P49137 400 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PEX5P50542 639 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SUOXP51687 545 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 METAP1P53582 386 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 COPAP53621 1224 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ARF5P84085 180 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ECT2LQ008S8 904 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 GNA12Q03113 381 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 GBE1Q04446 702 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 OVGP1Q12889 678 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SRSF5Q13243 272 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 DHX34Q14147 1143 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ELAVL3Q14576 367 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 GRM3Q14832 879 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 HNRNPA1L2Q32P51 320 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 AGBL2Q5U5Z8 902 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 LRRC38Q5VT99 294 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 DCAF12L1Q5VU92 463 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 NCBP2-AS2Q69YL0 99 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 NEK5Q6P3R8 708 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SLC23A3Q6PIS1 610 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 NPNTQ6UXI9 565 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SERPINA13PQ6UXR4 307 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PRR23BQ6ZRT6 265 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PEX26Q7Z412 305 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 NT5DC3Q86UY8 548 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CNPY4Q8N129 248 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 UMODL1-AS1Q8N2C9 162 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 FAM160A2Q8N612 972 aaPredicted RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 FRMD1Q8N878 549 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 C12orf50Q8NA57 414 aaPredicted RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 DCAF4L2Q8NA75 395 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MDGA1Q8NFP4 955 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 OR2T3Q8NH03 318 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 DNASE2BQ8WZ79 361 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PRCCQ92733 491 aaPredicted RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ARHGEF2Q92974 986 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ISG20Q96AZ6 181 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SIPA1Q96FS4 1042 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 LRIG1Q96JA1 1093 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CAPZA3Q96KX2 299 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 FAM129BQ96TA1 746 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SPON2Q9BUD6 331 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 NUSAP1Q9BXS6 441 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CEP44Q9C0F1 390 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 MKRN2Q9H000 416 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 EPN3Q9H201 632 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CARD9Q9H257 536 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PRDM16Q9HAZ2 1276 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PRSS16Q9NQE7 514 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 HOMER3Q9NSC5 361 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 SEMA4GQ9NTN9 838 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 USP36Q9P275 1121 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 BCCIPQ9P287 314 aaKnown RBP eCLIP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 VPS28Q9UK41 221 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 AMFRQ9UKV5 643 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 CDV3Q9UKY7 258 aaKnown RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 FZD4Q9ULV1 537 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 PACSIN2Q9UNF0 486 aaPredicted RBP5.34□□□□□ -1.55
SHMT1-211ENST00000618902 ERVW-1Q9UQF0 538 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 HS3ST2Q9Y278 367 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 NCKAP1Q9Y2A7 1128 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 EML5Q05BV3 1969 aa5.34□□□□□ -1.55
SHMT1-211ENST00000618902 DSPP15924 2871 aaKnown RBP5.34□□□□□ -1.56
SHMT1-211ENST00000618902 DOCK9Q9BZ29 2069 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SHROOM3Q8TF72 1996 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 TCRBV7S2A1N4TA0A589 114 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 TCRBV21S2A2A0A5A6 115 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 LRRD1A4D1F6 860 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 BHMG1C9JSJ3 638 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 H3BRJ5 948 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SLC30A4O14863 429 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 MUSKO15146 869 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 YKT6O15498 198 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 FGF10O15520 208 aaPredicted RBP5.33□□□□□ -1.56
SHMT1-211ENST00000618902 PSTPIP1O43586 416 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 KDELR3O43731 214 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 SPOPO43791 374 aa5.33□□□□□ -1.56
SHMT1-211ENST00000618902 ATP9BO43861 1147 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms