RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PPP2CBP62714 309 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 RACK1P63244 317 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 PPP2CAP67775 309 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 GBE1Q04446 702 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 SLC10A7Q0GE19 358 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 CCDC15Q0P6D6 951 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 HNRNPDQ14103 355 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 LBRQ14739 615 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 GRM3Q14832 879 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ZNF284Q2VY69 593 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 RALGPS1Q5JS13 557 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ATXN7L2Q5T6C5 722 aaPredicted RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 GDPD4Q6W3E5 623 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 DBX2Q6ZNG2 339 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 PGBD5Q8N414 524 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ACRBPQ8NEB7 543 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 OR14C36Q8NHC7 312 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 GRIN3AQ8TCU5 1115 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 HDAC11Q96DB2 347 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ZNF641Q96N77 438 aaPredicted RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 TUBGCP5Q96RT8 1024 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 MGME1Q9BQP7 344 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 CALN1Q9BXU9 219 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 ZDHHC5Q9C0B5 715 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 TM9SF3Q9HD45 589 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 GPR27Q9NS67 375 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 DNAAF2Q9NVR5 837 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 DTLQ9NZJ0 730 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 EIF2B4Q9UI10 523 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 ZFR2Q9UPR6 939 aaKnown RBP8.36□□□□□ -1.07
NEK3-209ENST00000618856 DMTF1Q9Y222 760 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 PCDHA3Q9Y5H8 950 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 PLXNA2O75051 1894 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 RALGAPA1Q6GYQ0 2036 aa8.36□□□□□ -1.07
NEK3-209ENST00000618856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 TMEM110-MUSTN1A8MSY1 372 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 MEI4A8MW99 385 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 KRIT1O00522 736 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 VILLO15195 856 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 MATN3O15232 486 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 HTRA2O43464 458 aaPredicted RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 TSPAN6O43657 245 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 BNIP3LO60238 219 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 FZD6O60353 706 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 RNGTTO60942 597 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 PALMO75781 387 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 FSBPO95073 299 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 WNT1P04628 370 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 UGT2B4P06133 528 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 ZNF883P0CG24 379 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 TIMP2P16035 220 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 CTNNA2P26232 953 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 CTNNA1P35221 906 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 PTPN7P35236 360 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 ABL2P42684 1182 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 SSR1P43307 286 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 MAPK8P45983 427 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 NOP2P46087 812 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 DNA2P51530 1060 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 RENBPP51606 427 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 AP1S1P61966 158 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 RAD51Q06609 339 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 PPIDQ08752 370 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 IHHQ14623 411 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 AGERQ15109 404 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 IFI16Q16666 785 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 RSPO4Q2I0M5 234 aaPredicted RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 STPG1Q5TH74 334 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 KIAA1161Q6NSJ0 714 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 MFSD7Q6UXD7 560 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 SRLQ86TD4 932 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 IQCHQ86VS3 1027 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 HORMAD1Q86X24 394 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 ZCCHC9Q8N567 271 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 ATPAF2Q8N5M1 289 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 SPC24Q8NBT2 197 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 TMEM145Q8NBT3 493 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 OR6K2Q8NGY2 324 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 GANCQ8TET4 914 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 KLHL32Q96NJ5 620 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 LENG8Q96PV6 779 aaPredicted RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 NUDCD1Q96RS6 583 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 RTKNQ9BST9 563 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 EDEM2Q9BV94 578 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 NUSAP1Q9BXS6 441 aaKnown RBP8.35□□□□□ -1.07
NEK3-209ENST00000618856 GOLPH3Q9H4A6 298 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 SUV39H2Q9H5I1 410 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 ZDHHC6Q9H6R6 413 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 SP110Q9HB58 689 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 KLHL11Q9NVR0 708 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
NEK3-209ENST00000618856 HYOU1Q9Y4L1 999 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms