RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 C1QTNF1Q9BXJ1 281 aa22.95■■□□□ 1.26
CBWD3-213ENST00000618217 SLC25A51Q9H1U9 297 aa22.95■■□□□ 1.26
CBWD3-213ENST00000618217 HAUS2Q9NVX0 235 aa22.95■■□□□ 1.26
CBWD3-213ENST00000618217 KLHL8Q9P2G9 620 aaPredicted RBP22.95■■□□□ 1.26
CBWD3-213ENST00000618217 OPHN1O60890 802 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 LEFTY1O75610 366 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 NEBLO76041 1014 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 STK10O94804 968 aaKnown RBP22.94■■□□□ 1.26
CBWD3-213ENST00000618217 TDGF1P13385 188 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 FNTAP49354 379 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 CCDC137Q6PK04 289 aaKnown RBP22.94■■□□□ 1.26
CBWD3-213ENST00000618217 DSG4Q86SJ6 1040 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 PRPF39Q86UA1 669 aaKnown RBP22.94■■□□□ 1.26
CBWD3-213ENST00000618217 GRIN3AQ8TCU5 1115 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 TUBGCP5Q96RT8 1024 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 DDX47Q9H0S4 455 aaKnown RBP22.94■■□□□ 1.26
CBWD3-213ENST00000618217 ZDHHC6Q9H6R6 413 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 SCUBE2Q9NQ36 999 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 TTLL3Q9Y4R7 772 aa22.94■■□□□ 1.26
CBWD3-213ENST00000618217 CCDC188H7C350 402 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 APBB3O95704 486 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 PRNPP04156 253 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 NFKB1P19838 968 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 MAPK8P45983 427 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 METAP1P53582 386 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 RAD51Q06609 339 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 ITKQ08881 620 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 CST6Q15828 149 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 WHAMMP3Q1A5X7 153 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 P3H1Q32P28 736 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 ZNF776Q68DI1 518 aaPredicted RBP22.93■■□□□ 1.26
CBWD3-213ENST00000618217 SPATA4Q8NEY3 305 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 MDGA1Q8NFP4 955 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 PIP4K2CQ8TBX8 421 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 HMGB4Q8WW32 186 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 EBF1Q9UH73 591 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 NEU2Q9Y3R4 380 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 RNASEH1O60930 286 aaKnown RBP22.93■■□□□ 1.26
CBWD3-213ENST00000618217 ETS1P14921 441 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 SKOR1P84550 965 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 GRM3Q14832 879 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 ANO7Q6IWH7 933 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 PRUNE1Q86TP1 453 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.93■■□□□ 1.26
CBWD3-213ENST00000618217 FCRL5Q96RD9 977 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 GORASP1Q9BQQ3 440 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 GBA3Q9H227 469 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 PCYOX1Q9UHG3 505 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 EML5Q05BV3 1969 aa22.93■■□□□ 1.26
CBWD3-213ENST00000618217 TRAFD1O14545 582 aaPredicted RBP22.92■■□□□ 1.26
CBWD3-213ENST00000618217 PIGNO95427 931 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 IL1BP01584 269 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 SLC8A1P32418 973 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 LMNB2Q03252 620 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 ZBTB16Q05516 673 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 GDPD4Q6W3E5 623 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 CAMK1DQ8IU85 385 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 SPATA22Q8NHS9 363 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 SLCO2A1Q92959 643 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 SIPA1Q96FS4 1042 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 ZNF641Q96N77 438 aaPredicted RBP22.92■■□□□ 1.26
CBWD3-213ENST00000618217 OSBPL1AQ9BXW6 950 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 ATP13A3Q9H7F0 1226 aa22.92■■□□□ 1.26
CBWD3-213ENST00000618217 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-213ENST00000618217 HTRA2O43464 458 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-213ENST00000618217 LAMTOR5O43504 91 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 ALDH1A2O94788 518 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 ADH1BP00325 375 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 IFNB1P01574 187 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 UGT2B4P06133 528 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 ZSCAN5DPP0CG00 497 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 CD86P42081 329 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 PSMD8P48556 350 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 KLHDC8BQ8IXV7 354 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 AADATQ8N5Z0 425 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 PRCCQ92733 491 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-213ENST00000618217 ECHDC3Q96DC8 303 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 OXNAD1Q96HP4 312 aaPredicted RBP22.91■■□□□ 1.26
CBWD3-213ENST00000618217 RBM15Q96T37 977 aaKnown RBP eCLIP22.91■■□□□ 1.26
CBWD3-213ENST00000618217 RSPH14Q9UHP6 348 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 PCDHGC4Q9Y5F7 938 aa22.91■■□□□ 1.26
CBWD3-213ENST00000618217 C1QTNF3-AMACRE9PGA6 284 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 DLL1O00548 723 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 MID1O15344 667 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 METTL18O95568 372 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 SERPINF2P08697 491 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 C5AR1P21730 350 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 RPL22P35268 128 aaKnown RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 DRD3P35462 400 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 PXNP49023 591 aaPredicted RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 TRAF2Q12933 501 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 SLC14A2Q15849 920 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 KCTD19Q17RG1 926 aaPredicted RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 FAM46CQ5VWP2 391 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 ITPRIPL1Q6GPH6 555 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 TSSK4Q6SA08 328 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 CACUL1Q86Y37 369 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 SPOCK2Q92563 424 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 ARRDC3Q96B67 414 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 LRFN3Q9BTN0 628 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms