RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SH3BP4Q9P0V3 963 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 DIAPH2O60879 1101 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 NR2C2P49116 596 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 BIKQ13323 160 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 UBXN11Q5T124 520 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 ARHGAP40Q5TG30 622 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 RALGPS2Q86X27 583 aaPredicted RBP11.02□□□□□ -0.64
POLR2A-209ENST00000617998 NUDCD3Q8IVD9 361 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 FAM9CQ8IZT9 166 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 RNF10Q8N5U6 811 aaKnown RBP11.02□□□□□ -0.64
POLR2A-209ENST00000617998 JPH3Q8WXH2 748 aaPredicted RBP11.02□□□□□ -0.64
POLR2A-209ENST00000617998 ZDHHC12Q96GR4 267 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 ACOX2Q99424 681 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 CHMP2BQ9UQN3 213 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 MTMR11A4FU01 709 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 SDC3O75056 442 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 SH3BGRLO75368 114 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 TFPIP10646 304 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 CLCN1P35523 988 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 PLEKHG4Q58EX7 1191 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 C9orf50Q5SZB4 431 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 LVRNQ6Q4G3 990 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 ADGRG2Q8IZP9 1017 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 C5orf34Q96MH7 638 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 FAM126AQ9BYI3 521 aaPredicted RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 CTIFO43310 598 aaKnown RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 FDPSP14324 419 aaKnown RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 HLA-DPA1P20036 260 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 LPOP22079 712 aaPredicted RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 RBM43Q6ZSC3 357 aaKnown RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 PRICKLE2Q7Z3G6 844 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 MSANTD3Q96H12 275 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 BTBD6Q96KE9 485 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 C12orf66Q96MD2 445 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 HSPA12BQ96MM6 686 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 SPHK2Q9NRA0 654 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 L1RE1Q9UN81 338 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 ERI2A8K979 691 aaKnown RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 SMAPO00193 183 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 CARTPTQ16568 116 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 SYDE1Q6ZW31 735 aaPredicted RBP11.02□□□□□ -0.65
POLR2A-209ENST00000617998 CFAP206Q8IYR0 622 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 KCNN2Q9H2S1 579 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 GPAMQ9HCL2 828 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 CACNG4Q9UBN1 327 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 NUMBLQ9Y6R0 609 aa11.02□□□□□ -0.65
POLR2A-209ENST00000617998 TMEM253P0C7T8 217 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 KITP10721 976 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CAPRIN2Q6IMN6 1127 aaKnown RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 C17orf64Q86WR6 236 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CAPSLQ8WWF8 208 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 TRIM55Q9BYV6 548 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 TMEM63CQ9P1W3 806 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 STXBP5LQ9Y2K9 1186 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 ATXN2Q99700 1313 aaKnown RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 ACP5P13686 325 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 STMN1P16949 149 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 PBX2P40425 430 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 MAXP61244 160 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 PRRT3Q5FWE3 981 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 PAOXQ6QHF9 649 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CCNJLQ8IV13 435 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 INTS9Q9NV88 658 aaKnown RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 FAF1Q9UNN5 650 aaPredicted RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 ANGPT2O15123 496 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 FKBP9O95302 570 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CCNB1P14635 433 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 ITPKBP27987 946 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CCT8P50990 548 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 NR0B2Q15466 257 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 TAF13Q15543 124 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 ADGRF1Q5T601 910 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 FKBP9P1Q75LS8 142 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 METTL16Q86W50 562 aaKnown RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CACNA2D3Q8IZS8 1091 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 FGF13Q92913 245 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 FRMD8Q9BZ67 464 aaPredicted RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 TMEM9BQ9NQ34 198 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 CNTN5O94779 1100 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 KLHL18O94889 574 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 UMPSP11172 480 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 SLC16A1P53985 500 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 PAGE2Q7Z2X7 111 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 LUZP2Q86TE4 346 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 VN1R2Q8NFZ6 395 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 MAGEH1Q9H213 219 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 A0A1W2PP55 124 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 TNFRSF10AO00220 468 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 HIST1H2ABP04908 130 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 MAGEA9P43362 315 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 IL2P60568 153 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 ILF2Q12905 390 aaKnown RBP11.01□□□□□ -0.65
POLR2A-209ENST00000617998 GALNT3Q14435 633 aa11.01□□□□□ -0.65
POLR2A-209ENST00000617998 NAB2Q15742 525 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms