RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	CSE1L	P55060	971 aa	Known RBP	10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	PGS1	Q32NB8	556 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	RBM48	Q5RL73	367 aa	Known RBP	10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	DHFR2	Q86XF0	187 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	SULF1	Q8IWU6	871 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	GPD1L	Q8N335	351 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	ESX1	Q8N693	406 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	BEST2	Q8NFU1	509 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	TRIM63	Q969Q1	353 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	DCPS	Q96C86	337 aa	Known RBP	10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	RIT2	Q99578	217 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	DHRS9	Q9BPW9	319 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	TEKT3	Q9BXF9	490 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	IL22	Q9GZX6	179 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	C12orf10	Q9HB07	376 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	SMPD3	Q9NY59	655 aa	Predicted RBP	10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958	PCDHGA3	Q9Y5H0	932 aa		10.84	□□□□□ -0.67
CPEB1-215	ENST00000617958		E7ENX8	843 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958		G3V2L1	256 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TEX28	O15482	410 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	BCAS1	O75363	584 aa	Predicted RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TIPRL	O75663	272 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	MLN	P12872	115 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	NR4A1	P22736	598 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	IL1R2	P27930	398 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	GRK3	P35626	688 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	HMGCS2	P54868	508 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ADARB1	P78563	741 aa	Known RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	HSPA14	Q0VDF9	509 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TNFAIP1	Q13829	316 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	SPATS1	Q496A3	300 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	CYBRD1	Q53TN4	286 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	CCDC81	Q6ZN84	652 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ZNF534	Q76KX8	674 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	DSG4	Q86SJ6	1040 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	GRAMD2A	Q8IUY3	354 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	FAM20C	Q8IXL6	584 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	PHF10	Q8WUB8	498 aa	Known RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ZNF606	Q8WXB4	792 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	VPS33A	Q96AX1	596 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	MAEL	Q96JY0	434 aa	Known RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	PCDHAC1	Q9H158	963 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	MUC3B	Q9H195	1237 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TRIT1	Q9H3H1	467 aa	Known RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	R3HDML	Q9H3Y0	253 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	DSE	Q9UL01	958 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	GRID2	O43424	1007 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	STAM2	O75886	525 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TOMM70	O94826	608 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	HLA-DRA	P01903	254 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	GSN	P06396	782 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ITIH1	P19827	911 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TCN1	P20061	433 aa	Predicted RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	FAS	P25445	335 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	PSMA2	P25787	234 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	NAMPT	P43490	491 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ATXN3	P54252	364 aa	Predicted RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	GABARAPL2	P60520	117 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ECT2L	Q008S8	904 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	VGLL4	Q14135	290 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	INPP5A	Q14642	412 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	CCDC58	Q4VC31	144 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	FKBP1C	Q5VVH2	108 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ZNF280D	Q6N043	979 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	TMEM270	Q6UE05	265 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	NAPRT	Q6XQN6	538 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	SLC22A16	Q86VW1	577 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ASCC1	Q8N9N2	400 aa	Known RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	SLC4A11	Q8NBS3	891 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	FAM156A	Q8NDB6	213 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	HDAC11	Q96DB2	347 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	KLRG1	Q96E93	195 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	DNAI2	Q9GZS0	605 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	LHPP	Q9H008	270 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	ELP3	Q9H9T3	547 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	CACNA2D2	Q9NY47	1150 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	KL	Q9UEF7	1012 aa		10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	COPG1	Q9Y678	874 aa	Known RBP	10.83	□□□□□ -0.68
CPEB1-215	ENST00000617958	PRORSD1P	A6NEY8	169 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	SAGE2P	A6NJ88	616 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	MTRF1	O75570	445 aa	Known RBP	10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	C4BPA	P04003	597 aa	Known RBP	10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	IL10	P22301	178 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	POLR2I	P36954	125 aa	Known RBP	10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	RARRES1	P49788	294 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	PLA2G16	P53816	162 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	P2RX3	P56373	397 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	MMRN1	Q13201	1228 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	DNASE1L3	Q13609	305 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	SKIV2L	Q15477	1246 aa	Known RBP	10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	TUBA3E	Q6PEY2	450 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	CRTC3	Q6UUV7	619 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	SLC16A12	Q6ZSM3	486 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	CPXCR1	Q8N123	301 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	SCML4	Q8N228	414 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	ARFGAP1	Q8N6T3	406 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	KCTD6	Q8NC69	237 aa		10.82	□□□□□ -0.68
CPEB1-215	ENST00000617958	AFG1L	Q8WV93	481 aa		10.82	□□□□□ -0.68

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