RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SEC13P55735 322 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 MFSD5Q6N075 450 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 NEPROQ6NW34 567 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 KYAT3Q6YP21 454 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 EIF1ADQ8N9N8 165 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 SCAIQ8N9R8 606 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 BADQ92934 168 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 PDLIM2Q96JY6 352 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 N4BP2Q86UW6 1770 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 H3BNH8 94 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 LATS1O95835 1130 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 KRT8P05787 483 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 NRLP54845 237 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 GNA12Q03113 381 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CAPN13Q6MZZ7 669 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 LCA5Q86VQ0 697 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 KRT73Q86Y46 540 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 NAT16Q8N8M0 369 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 AIF1LQ9BQI0 150 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 POLR1BQ9H9Y6 1135 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CAPN10Q9HC96 672 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 GULP1Q9UBP9 304 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 MYO1GB0I1T2 1018 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 PRR5-ARHGAP8B1AHC4 643 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ISM1B1AKI9 464 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 GOLGA8RI6L899 631 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CLDN5O00501 218 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 MDM4O15151 490 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 RPP40O75818 363 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 SYPP08247 313 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 RARAP10276 462 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CHN1P15882 459 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 RPL21P46778 160 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 COPZ1P61923 177 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 LSM12Q3MHD2 195 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 GALNTL6Q49A17 601 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF783Q6ZMS7 281 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 TMCO5AQ8N6Q1 288 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 OR4L1Q8NH43 312 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 REXO5Q96IC2 774 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CDHR5Q9HBB8 845 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 SCN3BQ9NY72 215 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 UBR2Q8IWV8 1755 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 C5orf60A6NFR6 353 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 OR10H2O60403 315 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 FSBPO95073 299 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ATG7O95352 703 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 IQCF3P0C7M6 154 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CASRP41180 1078 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ABL2P42684 1182 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 DGKEP52429 567 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 TBC1D25Q3MII6 688 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CHSY3Q70JA7 882 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZCCHC9Q8N567 271 aaKnown RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 SH3RF2Q8TEC5 729 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 POF1BQ8WVV4 589 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 TRIB2Q92519 343 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC22A18Q96BI1 424 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 LENG1Q96BZ8 264 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CACNA2D2Q9NY47 1150 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 CDC14AQ9UNH5 594 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 SIK3Q9Y2K2 1263 aa9.82□□□□□ -0.84
TNFRSF9-204ENST00000615230 LAMTOR5O43504 91 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 KLRC4O43908 158 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 KRT75O95678 551 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 SNAI1O95863 264 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 PBX3P40426 434 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 MDH1P40925 334 aaKnown RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 ARRB1P49407 418 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 FLOT2Q14254 428 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 SMAD1Q15797 465 aaKnown RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 ING5Q8WYH8 240 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 MSANTD3Q96H12 275 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAM161BQ96MY7 647 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 NKX2-4Q9H2Z4 354 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 ARHGAP20Q9P2F6 1191 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 CD207Q9UJ71 328 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 SCML2Q9UQR0 700 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 SNED1Q8TER0 1413 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 DDX3XO00571 662 aaKnown RBP eCLIP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 HAPLN1P10915 354 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 ENO3P13929 434 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 AGXTP21549 392 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 PSMA4P25789 261 aaKnown RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 LPIN1Q14693 890 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 AP5B1Q2VPB7 878 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 RASIP1Q5U651 963 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 LRRC55Q6ZSA7 311 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 SERINC5Q86VE9 423 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 XYLT1Q86Y38 959 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 SH2D3CQ8N5H7 860 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 ATAD1Q8NBU5 361 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 STYXQ8WUJ0 223 aa9.81□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZBTB9Q96C00 473 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms