RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 LRIG2O94898 1065 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 UQCRBP14927 111 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CHN2P52757 468 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COPAP53621 1224 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DSC1Q08554 894 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CDH17Q12864 832 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NME3Q13232 169 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MSLNQ13421 630 aaPredicted RBP10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 LSAMPQ13449 338 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PRPSAP1Q14558 356 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PPM1JQ5JR12 505 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ARHGAP12Q8IWW6 846 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 THEM5Q8N1Q8 247 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PIWIL2Q8TC59 973 aaKnown RBP10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RANBP9Q96S59 729 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TMPRSS4Q9NRS4 437 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ARHGAP26Q9UNA1 814 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COMMD3-BMI1R4GMX3 469 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SCNN1GP51170 649 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZNF157P51786 506 aaPredicted RBP10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FCGRTP55899 365 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 LPIN1Q14693 890 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TLR1Q15399 786 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FASTKD1Q53R41 847 aaKnown RBP10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GNASQ5JWF2 1037 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PDPK2PQ6A1A2 396 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TAC4Q86UU9 113 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 WDR75Q8IWA0 830 aaKnown RBP10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DQX1Q8TE96 717 aaKnown RBP10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TADA1Q96BN2 335 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 C8orf48Q96LL4 319 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TKTL2Q9H0I9 626 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ATP13A1Q9HD20 1204 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 COPG2Q9UBF2 871 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MID2Q9UJV3 735 aa10.99□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MATN3O15232 486 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SLC22A2O15244 555 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZSCAN9O15535 394 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MGEA5O60502 916 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MAGEA11P43364 429 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZBTB17Q13105 803 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TMEM259Q4ZIN3 620 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SLC44A4Q53GD3 710 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PPM1LQ5SGD2 360 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 METTL21CQ5VZV1 264 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TIGD7Q6NT04 549 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZNF683Q8IZ20 524 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GPR22Q99680 433 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 OXCT2Q9BYC2 517 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CATSPERBQ9H7T0 1116 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 KLHL8Q9P2G9 620 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SCML2Q9UQR0 700 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NYNRINQ9P2P1 1898 aaKnown RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MYO16Q9Y6X6 1858 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 A0A0J9YVX5 310 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 GOLGA8TH3BQL2 631 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 AGRPO00253 132 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ALDH1A3P47895 512 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 BTG3Q14201 252 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 FAM219BQ5XKK7 198 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 POTEHQ6S545 545 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CYP2R1Q6VVX0 501 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NAT16Q8N8M0 369 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZFP28Q8NHY6 868 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SLC39A13Q96H72 371 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NR1H4Q96RI1 486 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SORT1Q99523 831 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CCT7Q99832 543 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 WDR55Q9H6Y2 383 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PFDN4Q9NQP4 134 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ANXA9O76027 345 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 KLHL2O95198 593 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 AFF1P51825 1210 aaKnown RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NAA20P61599 178 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CBX3Q13185 183 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ITGA9Q13797 1035 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CYLC2Q14093 348 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MYLK3Q32MK0 819 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 N4BP2L1Q5TBK1 243 aaPredicted RBP10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SLC43A3Q8NBI5 491 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CCNYQ8ND76 341 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TRIB2Q92519 343 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CEP295NLQ96MC4 621 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PLEKHG4BQ96PX9 1271 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 SEZ6LQ9BYH1 1024 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 RNF19AQ9NV58 838 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ADA2Q9NZK5 511 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PCDHB12Q9Y5F1 795 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TMX2-CTNND1H3BSU7 103 aa10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 MAFKO60675 156 aa10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 CCR10P46092 362 aa10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PCID2Q5JVF3 399 aa10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 DUS1LQ6P1R4 473 aaKnown RBP10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 TRAF7Q6Q0C0 670 aa10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 NET1Q7Z628 596 aaPredicted RBP10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 PCSK9Q8NBP7 692 aaKnown RBP10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 OR52K1Q8NGK4 314 aa10.97□□□□□ -0.65
SENP3-EIF4A1-201ENST00000614237 ZNF778Q96MU6 729 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms