RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 GAD2Q05329 585 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 BNIP3Q12983 259 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 GPR17Q13304 367 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 XRCC4Q13426 336 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 DPYSQ14117 519 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 MORF4L2Q15014 288 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 TERF2Q15554 542 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 BTBD8Q5XKL5 378 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 PRSS55Q6UWB4 352 aaPredicted RBP8.64□□□□□ -1.03
CCL3-205ENST00000613928 SCUBE1Q8IWY4 988 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 NUP93Q8N1F7 819 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 ZCCHC9Q8N567 271 aaKnown RBP8.64□□□□□ -1.03
CCL3-205ENST00000613928 SH2D3CQ8N5H7 860 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 CCDC33Q8N5R6 958 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 NAT8LQ8N9F0 302 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 ATAD1Q8NBU5 361 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 RNF139Q8WU17 664 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 ATXN2LQ8WWM7 1075 aaKnown RBP8.64□□□□□ -1.03
CCL3-205ENST00000613928 PRCCQ92733 491 aaPredicted RBP8.64□□□□□ -1.03
CCL3-205ENST00000613928 TOP1MTQ969P6 601 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 RTP4Q96DX8 246 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 FCRL3Q96P31 734 aaPredicted RBP8.64□□□□□ -1.03
CCL3-205ENST00000613928 OLFM3Q96PB7 478 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 IER2Q9BTL4 223 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 PRDM16Q9HAZ2 1276 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 RC3H2Q9HBD1 1191 aaKnown RBP8.64□□□□□ -1.03
CCL3-205ENST00000613928 ABCC13Q9NSE7 274 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 OSER1Q9NX31 292 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCL3-205ENST00000613928 IL37Q9NZH6 218 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 DTLQ9NZJ0 730 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 HEY1Q9Y5J3 304 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 BDP1A6H8Y1 2624 aa8.64□□□□□ -1.03
CCL3-205ENST00000613928 TCRBV7S3A2A0A539 114 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 FAM92AA1XBS5 289 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 H7C4K7 107 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 EEF2KO00418 725 aaKnown RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 KIAA0355O15063 1070 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 DCLK1O15075 740 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 KCNN4O15554 427 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 ADAM12O43184 909 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 IRAK2O43187 625 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 CREB3O43889 395 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 MFSD11O43934 449 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SOAT2O75908 522 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TMEM63AO94886 807 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TIMP1P01033 207 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SCG5P05408 212 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 GSTM1P09488 218 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 HAPLN1P10915 354 aaPredicted RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 PABPC1P11940 636 aaKnown RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 ERCC2P18074 760 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 GRIA2P42262 883 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 HCAR3P49019 387 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 NR2C2P49116 596 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 EIF3BP55884 814 aaKnown RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 GFRA1P56159 465 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 DEFB103AP81534 67 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SQSTM1Q13501 440 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 PAFAH1B3Q15102 231 aaKnown RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 KYNUQ16719 465 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SLC45A4Q5BKX6 768 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 ARTNQ5T4W7 220 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 AGBL2Q5U5Z8 902 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 DENND2CQ68D51 928 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 KCTD16Q68DU8 428 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 KCNT2Q6UVM3 1135 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 RFX8Q6ZV50 586 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TMCO2Q7Z6W1 182 aaPredicted RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 PCGF5Q86SE9 256 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 CDKL3Q8IVW4 592 aaPredicted RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 PPIL6Q8IXY8 311 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 NETO2Q8NC67 525 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 FLCNQ8NFG4 579 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 UHMK1Q8TAS1 419 aaKnown RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 SPPL2BQ8TCT7 592 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 CASP10Q92851 521 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 ZNF689Q96CS4 500 aaPredicted RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 IGSF21Q96ID5 467 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 ATP6V1G3Q96LB4 118 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 QKIQ96PU8 341 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCL3-205ENST00000613928 TTPALQ9BTX7 342 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TMEM109Q9BVC6 243 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TRIM62Q9BVG3 475 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TKTL2Q9H0I9 626 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 TSPYL1Q9H0U9 437 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SMOC2Q9H3U7 446 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 CARS2Q9HA77 564 aaKnown RBP8.63□□□□□ -1.03
CCL3-205ENST00000613928 ARHGEF38Q9NXL2 777 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SFMBT1Q9UHJ3 866 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 ADAM21Q9UKJ8 722 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 NUDT5Q9UKK9 219 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SHOC2Q9UQ13 582 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 SCML2Q9UQR0 700 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 PLXNA3P51805 1871 aa8.63□□□□□ -1.03
CCL3-205ENST00000613928 ZNF638Q14966 1978 aaKnown RBP8.62□□□□□ -1.03
CCL3-205ENST00000613928 TRBV23-1A0A0A0MS06 115 aa8.62□□□□□ -1.03
CCL3-205ENST00000613928 ABHD14A-ACY1A0A1B0GW23 586 aa8.62□□□□□ -1.03
CCL3-205ENST00000613928 WDR27A2RRH5 827 aa8.62□□□□□ -1.03
CCL3-205ENST00000613928 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms