RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 VAT1Q99536 393 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 MGME1Q9BQP7 344 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 HERPUD2Q9BSE4 406 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 FRMD8P1Q9BZ68 369 aaPredicted RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 PCED1AQ9H1Q7 454 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 KCND1Q9NSA2 647 aa13.43□□□□□ -0.26
MDC1-209ENST00000613547 SMG5Q9UPR3 1016 aaKnown RBP13.43□□□□□ -0.26
MDC1-209ENST00000613547 CKAP5Q14008 2032 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 A0A1W2PQ67 120 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 ENC1O14682 589 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 MUSKO15146 869 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 INSIG1O15503 277 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 CEP104O60308 925 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 SEMA4FO95754 770 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 RBP3P10745 1247 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 CA4P22748 312 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 GKP32189 559 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 DRD3P35462 400 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 RGRP47804 291 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 MAXP61244 160 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 NHLH1Q02575 133 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 CNTN1Q12860 1018 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 KLF1Q13351 362 aaPredicted RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 DARS2Q6PI48 645 aaKnown RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 BRAT1Q6PJG6 821 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 SLC13A5Q86YT5 568 aaPredicted RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 CADM4Q8NFZ8 388 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 HTR3CQ8WXA8 447 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 FOXJ1Q92949 421 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 RAB7BQ96AH8 199 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 ZC3H10Q96K80 434 aaKnown RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 PBKQ96KB5 322 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 KLHL32Q96NJ5 620 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 IL12RB2Q99665 862 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 GPR174Q9BXC1 333 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 NEUROG2Q9H2A3 272 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 KDM4CQ9H3R0 1056 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 CD93Q9NPY3 652 aa13.42□□□□□ -0.26
MDC1-209ENST00000613547 TPX2Q9ULW0 747 aaKnown RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 MYO18AQ92614 2054 aaKnown RBP13.42□□□□□ -0.26
MDC1-209ENST00000613547 CHD5Q8TDI0 1954 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 FAM47DPA6NHR8 397 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 C16orf96A6NNT2 1141 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 SOCS5O75159 536 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 PIGNO95427 931 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 LMNAP02545 664 aaKnown RBP13.41□□□□□ -0.26
MDC1-209ENST00000613547 CR2P20023 1033 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 BCKDHBP21953 392 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 ACSL1P33121 698 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 DPP6P42658 865 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 SUOXP51687 545 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 METAP1P53582 386 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 POLR2LP62875 67 aaKnown RBP13.41□□□□□ -0.26
MDC1-209ENST00000613547 PLK5Q496M5 336 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 LAIR1Q6GTX8 287 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 NCEH1Q6PIU2 408 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 PGBD5Q8N414 524 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 FRMD1Q8N878 549 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 OR2T34Q8NGX1 318 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 OR14C36Q8NHC7 312 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 HCAR2Q8TDS4 363 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 FAM131CQ96AQ9 280 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 ARRDC3Q96B67 414 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
MDC1-209ENST00000613547 SEMA3CQ99985 751 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 DUSP15Q9H1R2 295 aaPredicted RBP13.41□□□□□ -0.26
MDC1-209ENST00000613547 SUV39H2Q9H5I1 410 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 KLHL8Q9P2G9 620 aaPredicted RBP13.41□□□□□ -0.26
MDC1-209ENST00000613547 DKK3Q9UBP4 350 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 SERGEFQ9UGK8 458 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 MBD1Q9UIS9 605 aaPredicted RBP13.41□□□□□ -0.26
MDC1-209ENST00000613547 TRHDEQ9UKU6 1024 aa13.41□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3DA0A087WVF3 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3IA0A087WXS9 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3EA0A087X179 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3KA0A087X1G2 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 BCLAF3A2AJT9 711 aaKnown RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 CFAP69A5D8W1 941 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3FA6NER0 549 aaPredicted RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 MEI4A8MW99 385 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3LB9A6J9 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 PROB1E7EW31 1015 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 RNF103O00237 685 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 NEMP1O14524 444 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 PLRG1O43660 514 aaKnown RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 FGGP02679 453 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 ATP1A1P05023 1023 aaKnown RBP13.4□□□□□ -0.26
MDC1-209ENST00000613547 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 SERPINF2P08697 491 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 TBC1D3HP0C7X1 549 aa13.4□□□□□ -0.26
MDC1-209ENST00000613547 ADRB3P13945 408 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms