RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 RAB10P61026 200 aa17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 C15orf52Q6ZUT6 534 aaKnown RBP17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 FAM20CQ8IXL6 584 aa17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 SEMA4DQ92854 862 aa17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 MLPHQ9BV36 600 aaPredicted RBP17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 CHID1Q9BWS9 393 aa17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 ATXN3LQ9H3M9 355 aa17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 POLR1BQ9H9Y6 1135 aa17.57■□□□□ 0.4
HMGXB3-206ENST00000613459 HDAC3O15379 428 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 PSMB4P28070 264 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 POLD2P49005 469 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 SOX10P56693 466 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ALG11Q2TAA5 492 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 PPM1LQ5SGD2 360 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 FAM220AQ7Z4H9 259 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ZSWIM2Q8NEG5 633 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 MAGEE2Q8TD90 523 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 DMTF1Q9Y222 760 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 NRCAMQ92823 1304 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ANKRD63C9JTQ0 380 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ABLIM1O14639 778 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ADCY6O43306 1168 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 OTCP00480 354 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 FGFR3P22607 806 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 HNRNPH3P31942 346 aaKnown RBP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 BNC1Q01954 994 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 SLC39A12Q504Y0 691 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 KLRC2P26717 231 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 MAPK9P45984 424 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 MAPKAPK2P49137 400 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 TRAP1Q12931 704 aaKnown RBP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 PTGR2Q8N8N7 351 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 CCDC28BQ9BUN5 200 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 UBE2QL1A1L167 161 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 TEX28O15482 410 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 PSMD10O75832 226 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 GSSP48637 474 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 CXCL9Q07325 125 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 BMT2Q1RMZ1 405 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 LIPMQ5VYY2 423 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 HEXDCQ8WVB3 486 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 KLQ9UEF7 1012 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 DNMT3LQ9UJW3 386 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ING4Q9UNL4 249 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 TSPAN3O60637 253 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 USP17L7P0C7H9 530 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 CASP7P55210 303 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ANXA8L1Q5VT79 327 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 GATAD2AQ86YP4 633 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 RIOX2Q8IUF8 465 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 SPATA20Q8TB22 786 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 CERKQ8TCT0 537 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 AP3S1Q92572 193 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ZYG11BQ9C0D3 744 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 ALG9Q9H6U8 611 aa17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-206ENST00000613459 URADA6NGE7 173 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 MTRF1O75570 445 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 AGMOQ6ZNB7 445 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 SHC3Q92529 594 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 EBNA1BP2Q99848 306 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 SEMA4BQ9NPR2 832 aaPredicted RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 ROBO3Q96MS0 1386 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 A0A087X0B3 334 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 OR6B1O95007 311 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 RPL9P32969 192 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 RPL22P35268 128 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 HNMTP50135 292 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 DUPD1Q68J44 220 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 ANKRD52Q8NB46 1076 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 EEF1AKMT1Q8WVE0 214 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 VPS4AQ9UN37 437 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 LCA5LO95447 670 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 LGALS2P05162 132 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 MAPKAPK3Q16644 382 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 EARS2Q5JPH6 523 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 FAM81AQ8TBF8 368 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 GORASP1Q9BQQ3 440 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 TBC1D10AQ9BXI6 508 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 WDR12Q9GZL7 423 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 EML1O00423 815 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 FSCN2O14926 492 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 RECQL4O94761 1208 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 IDO1P14902 403 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 ACVR2BQ13705 512 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 PFKFB4Q16877 469 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 OR52K1Q8NGK4 314 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 HELQQ8TDG4 1101 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 VMP1Q96GC9 406 aa17.55■□□□□ 0.4
HMGXB3-206ENST00000613459 TGFBR2P37173 567 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CDH8P55286 799 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 BTG3Q14201 252 aaPredicted RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 FNDC3BQ53EP0 1204 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 CES3Q6UWW8 571 aa17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 PCDH20Q8N6Y1 951 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-206ENST00000613459 TCF12Q99081 682 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms