RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TRMT6Q9UJA5 497 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 AP4S1Q9Y587 144 aa8.78□□□□□ -1
LIG4-204ENST00000611712 C2orf81A6NN90 581 aa8.77□□□□□ -1
LIG4-204ENST00000611712 ZNF487B1APH4 448 aa8.77□□□□□ -1
LIG4-204ENST00000611712 PEX1O43933 1283 aa8.77□□□□□ -1
LIG4-204ENST00000611712 KPNA6O60684 536 aa8.77□□□□□ -1
LIG4-204ENST00000611712 PIRTP0C851 137 aa8.77□□□□□ -1
LIG4-204ENST00000611712 IRF1P10914 325 aa8.77□□□□□ -1
LIG4-204ENST00000611712 LRPAP1P30533 357 aa8.77□□□□□ -1
LIG4-204ENST00000611712 CLCN5P51795 746 aa8.77□□□□□ -1
LIG4-204ENST00000611712 PFKFB4Q16877 469 aa8.77□□□□□ -1
LIG4-204ENST00000611712 SAMD4BQ5PRF9 694 aaKnown RBP8.77□□□□□ -1
LIG4-204ENST00000611712 TBCELQ5QJ74 424 aa8.77□□□□□ -1
LIG4-204ENST00000611712 TMEM198Q66K66 360 aa8.77□□□□□ -1
LIG4-204ENST00000611712 OLFML2BQ68BL8 750 aa8.77□□□□□ -1
LIG4-204ENST00000611712 FRMD7Q6ZUT3 714 aa8.77□□□□□ -1
LIG4-204ENST00000611712 HDAC10Q969S8 669 aa8.77□□□□□ -1
LIG4-204ENST00000611712 OR52B2Q96RD2 323 aa8.77□□□□□ -1
LIG4-204ENST00000611712 RHOBTB2Q9BYZ6 727 aa8.77□□□□□ -1
LIG4-204ENST00000611712 EBF3Q9H4W6 596 aa8.77□□□□□ -1
LIG4-204ENST00000611712 RIC8BQ9NVN3 520 aa8.77□□□□□ -1
LIG4-204ENST00000611712 AFF4Q9UHB7 1163 aaKnown RBP8.77□□□□□ -1
LIG4-204ENST00000611712 ENDOD1O94919 500 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 SNAI1O95863 264 aaPredicted RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 AMHP03971 560 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 SNRPB2P08579 225 aaKnown RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 COL6A2P12110 1019 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 ETS2P15036 469 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 GM2AP17900 193 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 TAS2R39P59534 338 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 PHEXP78562 749 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 TAZQ16635 292 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 ZNF792Q3KQV3 632 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 STXBP5Q5T5C0 1151 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 GK5Q6ZS86 529 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 IFNLR1Q8IU57 520 aaPredicted RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 PLD6Q8N2A8 252 aaKnown RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 NTAN1Q96AB6 310 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 GRIP2Q9C0E4 1043 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 PIF1Q9H611 641 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 FAM50BQ9Y247 325 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 GIT1Q9Y2X7 761 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 VWA7Q9Y334 891 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 PIRO00625 290 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 VPS26AO75436 327 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 GNAZP19086 355 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 HK2P52789 917 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 SATB1Q01826 763 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 ROR2Q01974 943 aaKnown RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 FRG1Q14331 258 aaKnown RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 PAFAH1B3Q15102 231 aaKnown RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 BRMS1LQ5PSV4 323 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 RAP1GAP2Q684P5 730 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 PTRHD1Q6GMV3 140 aaKnown RBP8.77□□□□□ -1.01
LIG4-204ENST00000611712 MFN1Q8IWA4 741 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 TP53INP2Q8IXH6 220 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 CLEC4FQ8N1N0 589 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 FBXO39Q8N4B4 442 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 RIN3Q8TB24 985 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 BHMTQ93088 406 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 GPR63Q9BZJ6 419 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 KCNK13Q9HB14 408 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 LATS2Q9NRM7 1088 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 PKD2L2Q9NZM6 624 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 PCDHB5Q9Y5E4 795 aa8.77□□□□□ -1.01
LIG4-204ENST00000611712 FAM72CH0Y354 149 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TRIM38O00635 465 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TSPAN3O60637 253 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 BEST1O76090 585 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CRTAMO95727 393 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 OR4Q2P0C623 313 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CCNCP24863 283 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 YWHAQP27348 245 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 HOXA11P31270 313 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 RANBP1P43487 201 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SLC11A2P49281 568 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 AQP4P55087 323 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 AASDHQ4L235 1098 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 SGO1Q5FBB7 561 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 TMCO4Q5TGY1 634 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FAM72AQ5TYM5 149 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 FAM72DQ6L9T8 149 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 EFL1Q7Z2Z2 1120 aaKnown RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 LDB1Q86U70 411 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 FAM72BQ86X60 149 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 PTGR2Q8N8N7 351 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 SEMA3CQ99985 751 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 MKS1Q9NXB0 559 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 MARCH2Q9P0N8 246 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 NDUFAF1Q9Y375 327 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 AP4B1Q9Y6B7 739 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 DNAJC25-GNG10A0A024R161 153 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CCL22O00626 93 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CNMDO75829 334 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 NFKBIAP25963 317 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 CHRNA4P43681 627 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 SOX4Q06945 474 aaPredicted RBP8.76□□□□□ -1.01
LIG4-204ENST00000611712 DDR2Q16832 855 aa8.76□□□□□ -1.01
LIG4-204ENST00000611712 ANKS6Q68DC2 871 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms