RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 MYLIPQ8WY64 445 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 TTC17Q96AE7 1141 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 RPL10LQ96L21 214 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 DDX50Q9BQ39 737 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 CINPQ9BW66 212 aaPredicted RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 IARS2Q9NSE4 1012 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 FCF1Q9Y324 198 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 RWDD3Q9Y3V2 267 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 TYW5A2RUC4 315 aaKnown RBP12.46□□□□□ -0.41
TP53-219ENST00000610538 KRT37O76014 449 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 SNRPAP09012 282 aaKnown RBP12.46□□□□□ -0.41
TP53-219ENST00000610538 BMP1P13497 986 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 SP100P23497 879 aaPredicted RBP12.46□□□□□ -0.41
TP53-219ENST00000610538 MPP3Q13368 585 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 QPCTQ16769 361 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 TTC39BQ5VTQ0 682 aaPredicted RBP12.46□□□□□ -0.41
TP53-219ENST00000610538 HTR3DQ70Z44 454 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.41
TP53-219ENST00000610538 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 CDKL2Q92772 493 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
TP53-219ENST00000610538 NAT9Q9BTE0 207 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 TM6SF2Q9BZW4 377 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 TLE6Q9H808 572 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 PIDD1Q9HB75 910 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 TXNDC16Q9P2K2 825 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 GRID1Q9ULK0 1009 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 CHKBQ9Y259 395 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 KCTD3Q9Y597 815 aa12.46□□□□□ -0.41
TP53-219ENST00000610538 TYROBPO43914 113 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 USP1O94782 785 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 LUC7L3O95232 432 aaKnown RBP12.46□□□□□ -0.42
TP53-219ENST00000610538 CD160O95971 181 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 SLC4A1P02730 911 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 SAT1P21673 171 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 CCT5P48643 541 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 UBE3AQ05086 875 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 MGAT5Q09328 741 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 NR1H3Q13133 447 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 ZKSCAN8Q15776 578 aaPredicted RBP12.46□□□□□ -0.42
TP53-219ENST00000610538 SIRPB2Q5JXA9 342 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 CDHR3Q6ZTQ4 885 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 CCNJLQ8IV13 435 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 HJURPQ8NCD3 748 aaPredicted RBP12.46□□□□□ -0.42
TP53-219ENST00000610538 ITFG1Q8TB96 612 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 IFT43Q96FT9 208 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 NKX2-4Q9H2Z4 354 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 PPCSQ9HAB8 311 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 TDP1Q9NUW8 608 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 SOX13Q9UN79 622 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 VCANP13611 3396 aa12.46□□□□□ -0.42
TP53-219ENST00000610538 FAM237BA0A1B0GVD1 139 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 EPOPA6NHQ4 379 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 PSMD3O43242 534 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 BNIP3LO60238 219 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 PDHA1P08559 390 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 WEE1P30291 646 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 CD70P32970 193 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 TMPRSS15P98073 1019 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 CTBP1Q13363 440 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 CYTH1Q15438 398 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 PCID2Q5JVF3 399 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 SPANXN3Q5MJ09 141 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 ATXN7L2Q5T6C5 722 aaPredicted RBP12.45□□□□□ -0.42
TP53-219ENST00000610538 PKN3Q6P5Z2 889 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 PACS1Q6VY07 963 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 STRA8Q7Z7C7 330 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 CPLX4Q7Z7G2 160 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 KCNMB4Q86W47 210 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 ARID3BQ8IVW6 561 aaPredicted RBP12.45□□□□□ -0.42
TP53-219ENST00000610538 ACE2Q9BYF1 805 aaPredicted RBP12.45□□□□□ -0.42
TP53-219ENST00000610538 PCMTD2Q9NV79 361 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 ACTL7BQ9Y614 415 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 TCP11X1B4DZS4 312 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 TRIM24O15164 1050 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 SMAD6O43541 496 aaKnown RBP12.45□□□□□ -0.42
TP53-219ENST00000610538 RFPL1O75677 317 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 KRT38O76015 456 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 TMCC1O94876 653 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 RB1P06400 928 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 SERPINF2P08697 491 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 GSTA2P09210 222 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 ADRA1DP25100 572 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 IRX4P78413 519 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 PDE1BQ01064 536 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 RASA2Q15283 850 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 SEPT7Q16181 437 aaKnown RBP12.45□□□□□ -0.42
TP53-219ENST00000610538 PPM1JQ5JR12 505 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 TEDDM1Q5T9Z0 273 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 LVRNQ6Q4G3 990 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 DENND6AQ8IWF6 608 aa12.45□□□□□ -0.42
TP53-219ENST00000610538 LRRC34Q8IZ02 419 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms