RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 FBXO5Q9UKT4 447 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 RPL26L1Q9UNX3 145 aaKnown RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 TRIM17Q9Y577 477 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 F5H5T6 163 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 GYG2O15488 501 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 ATP5C1P36542 298 aaKnown RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 ACVRL1P37023 503 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 TUFMP49411 452 aaKnown RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 ALDH7A1P49419 539 aaKnown RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 APLP1P51693 650 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 RAB10P61026 200 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 ZNF470Q6ECI4 717 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 NEPROQ6NW34 567 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 LGI2Q8N0V4 545 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 ACE2Q9BYF1 805 aaPredicted RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 OXSMQ9NWU1 459 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 SORCS3Q9UPU3 1222 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 BACE2Q9Y5Z0 518 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 GSC2O15499 205 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 PRAMEF11O60813 436 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 PAPSS2O95340 614 aaPredicted RBP28.33■■■□□ 2.13
CSPG5-205ENST00000610462 AVPR1AP37288 418 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 CD151P48509 253 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 VEGFBP49765 207 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 ALDH18A1P54886 795 aaKnown RBP28.33■■■□□ 2.13
CSPG5-205ENST00000610462 ZYG11AQ6WRX3 759 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 NAPRTQ6XQN6 538 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 KIAA0408Q6ZU52 694 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 MFSD6LQ8IWD5 586 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 PAK6Q9NQU5 681 aaPredicted RBP28.33■■■□□ 2.13
CSPG5-205ENST00000610462 RUVBL2Q9Y230 463 aaKnown RBP28.33■■■□□ 2.13
CSPG5-205ENST00000610462 ACOT9Q9Y305 439 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.33■■■□□ 2.13
CSPG5-205ENST00000610462 ACSL4O60488 711 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 OR1D2P34982 312 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 ETFBP38117 255 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 TMCO4Q5TGY1 634 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 MAVSQ7Z434 540 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 TMEM151AQ8N4L1 468 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 PDZD8Q8NEN9 1154 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 OVCA2Q8WZ82 227 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 DEFB118Q96PH6 123 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 TAS2R1Q9NYW7 299 aa28.33■■■□□ 2.13
CSPG5-205ENST00000610462 CPSF2Q9P2I0 782 aaKnown RBP28.33■■■□□ 2.13
CSPG5-205ENST00000610462 PARNO95453 639 aaKnown RBP28.32■■■□□ 2.12
CSPG5-205ENST00000610462 STMN1P16949 149 aa28.32■■■□□ 2.12
CSPG5-205ENST00000610462 RPL17P18621 184 aaKnown RBP28.32■■■□□ 2.12
CSPG5-205ENST00000610462 CRABP2P29373 138 aa28.32■■■□□ 2.12
CSPG5-205ENST00000610462 WASHC2DQ5SRD0 308 aa28.32■■■□□ 2.12
CSPG5-205ENST00000610462 CALML6Q8TD86 181 aa28.32■■■□□ 2.12
CSPG5-205ENST00000610462 KCTD4Q8WVF5 259 aa28.32■■■□□ 2.12
CSPG5-205ENST00000610462 UXTQ9UBK9 157 aaPredicted RBP28.32■■■□□ 2.12
CSPG5-205ENST00000610462 APOBEC2Q9Y235 224 aaKnown RBP28.32■■■□□ 2.12
CSPG5-205ENST00000610462 TTC24A2A3L6 582 aaPredicted RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF195O14628 629 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 HSPA4LO95757 839 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 ENO1P06733 434 aaKnown RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 PGGT1BP53609 377 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 E2F5Q15329 346 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 CEP97Q8IW35 865 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 CENPLQ8N0S6 344 aaPredicted RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 GABPB2Q8TAK5 448 aaPredicted RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 TAGLN3Q9UI15 199 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 LOC285095A0A1B0GVY8 99 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 SBK3P0C264 359 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 SLC6A4P31645 630 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 IDH3AP50213 366 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 PRKAA2P54646 552 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 SIRPB2Q5JXA9 342 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 DEFB128Q7Z7B8 93 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 RNF168Q8IYW5 571 aaPredicted RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 ELMO2Q96JJ3 720 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 SCYL1Q96KG9 808 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 GATA5Q9BWX5 397 aaPredicted RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 VN1R3Q9BXE9 311 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 POLR1EQ9GZS1 481 aaKnown RBP28.31■■■□□ 2.12
CSPG5-205ENST00000610462 RETREG1Q9H6L5 497 aa28.31■■■□□ 2.12
CSPG5-205ENST00000610462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.3■■■□□ 2.12
CSPG5-205ENST00000610462 TK2O00142 265 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 UPP2O95045 317 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 MYCP01106 439 aaPredicted RBP28.3■■■□□ 2.12
CSPG5-205ENST00000610462 RABGAP1LQ5R372 815 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 WLSQ5T9L3 541 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.3■■■□□ 2.12
CSPG5-205ENST00000610462 CFAP52Q8N1V2 620 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 TEX9Q8N6V9 391 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 STYXQ8WUJ0 223 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF512Q96ME7 567 aaPredicted RBP28.3■■■□□ 2.12
CSPG5-205ENST00000610462 ZNF599Q96NL3 588 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 PPP1R12CQ9BZL4 782 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 CWH43Q9H720 699 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 PDFQ9HBH1 243 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 L3MBTL1Q9Y468 752 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 MROH6A6NGR9 719 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 POU4F1Q01851 419 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 PREPLQ4J6C6 727 aaPredicted RBP28.3■■■□□ 2.12
CSPG5-205ENST00000610462 LIPMQ5VYY2 423 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 LRRC8EQ6NSJ5 796 aa28.3■■■□□ 2.12
CSPG5-205ENST00000610462 RFWD3Q6PCD5 774 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms