RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF419Q96HQ0 510 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 FSD1LQ9BXM9 530 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 PDE4DIPQ5VU43 2346 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 MSI1O43347 362 aaKnown RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 DENRO43583 198 aaKnown RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 TMCC1O94876 653 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 NPR3P17342 541 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 FAM83EQ2M2I3 478 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 SLC27A1Q6PCB7 646 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 SCIMPQ6UWF3 145 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 CLEC14AQ86T13 490 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 DCBLD1Q8N8Z6 715 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 KDM1BQ8NB78 822 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 ARRDC4Q8NCT1 418 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 PTTG2Q9NZH5 202 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 IGSF9Q9P2J2 1179 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 ANK1P16157 1881 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 NR5A2O00482 541 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 SDHDO14521 159 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 CCDC166P0CW27 439 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 SETSIPP0DME0 302 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 HPCAP84074 193 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 DPYSQ14117 519 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 ZNF484Q5JVG2 852 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 MARCH8Q5T0T0 291 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 PIM3Q86V86 326 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 ZNF410Q86VK4 478 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 ZDHHC17Q8IUH5 632 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 OR52K2Q8NGK3 314 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 MRPS26Q9BYN8 205 aaKnown RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 MPP6Q9NZW5 540 aa20.62■□□□□ 0.89
SSBP3-216ENST00000610401 PRPF19Q9UMS4 504 aaKnown RBP20.62■□□□□ 0.89
SSBP3-216ENST00000610401 RNF103-CHMP3A0A140T963 221 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 TMEM114B3SHH9 223 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 UBDO15205 165 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 TADA2AO75478 443 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 RPS12P25398 132 aaKnown RBP20.61■□□□□ 0.89
SSBP3-216ENST00000610401 PTPRCAPQ14761 206 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 C16orf72Q14CZ0 275 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 SPPL2CQ8IUH8 684 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 ALG9Q9H6U8 611 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 CPA4Q9UI42 421 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 PSMD12O00232 456 aaPredicted RBP20.61■□□□□ 0.89
SSBP3-216ENST00000610401 PIRTP0C851 137 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 LILRA4P59901 499 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 TWF2Q6IBS0 349 aaKnown RBP20.61■□□□□ 0.89
SSBP3-216ENST00000610401 TMEM102Q8N9M5 508 aaPredicted RBP20.61■□□□□ 0.89
SSBP3-216ENST00000610401 RIN3Q8TB24 985 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 NPY6RQ99463 290 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 C1QTNF1Q9BXJ1 281 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 DNAAF2Q9NVR5 837 aaKnown RBP20.61■□□□□ 0.89
SSBP3-216ENST00000610401 EBF1Q9UH73 591 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 PHF24Q9UPV7 400 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 PCDHGA7Q9Y5G6 932 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 LCTP09848 1927 aa20.61■□□□□ 0.89
SSBP3-216ENST00000610401 SOCS2O14508 198 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 ACOT8O14734 319 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 DYNC1LI2O43237 492 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-216ENST00000610401 BCAS2O75934 225 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-216ENST00000610401 TAF6P49848 677 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 PSMD7P51665 324 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 RAB10P61026 200 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 CDH17Q12864 832 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 METTL21CQ5VZV1 264 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 PAQR9Q6ZVX9 377 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 LPPQ93052 612 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 DUSP16Q9BY84 665 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 CASS4Q9NQ75 786 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 RAB26Q9ULW5 256 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 TTC3P53804 2025 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 A0A0J9YVX5 310 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 MRASO14807 208 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 CABYRO75952 493 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 ZNF26P17031 533 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-216ENST00000610401 CDH2P19022 906 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-216ENST00000610401 PLA2G4EQ3MJ16 856 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 VPS26BQ4G0F5 336 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 REP15Q6BDI9 236 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 CYS1Q717R9 158 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 KCNN1Q92952 543 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 C16orf70Q9BSU1 422 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 RHOJQ9H4E5 214 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 NCKIPSDQ9NZQ3 722 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 ARHGAP10A1A4S6 786 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 FBP2O00757 339 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 SIX3O95343 332 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-216ENST00000610401 LRPAP1P30533 357 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 XIAPP98170 497 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 IKBKEQ14164 716 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 ANKDD1AQ495B1 522 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 TFAP2DQ7Z6R9 452 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 GBA3Q9H227 469 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 CDC14AQ9UNH5 594 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 DOLKQ9UPQ8 538 aa20.6■□□□□ 0.89
SSBP3-216ENST00000610401 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
SSBP3-216ENST00000610401 ARL1P40616 181 aaPredicted RBP20.59■□□□□ 0.89
SSBP3-216ENST00000610401 ACADSBP45954 432 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 DDIASQ8IXT1 998 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 ADCY4Q8NFM4 1077 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms