RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 FBXL19Q6PCT2 694 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 C3orf18Q9UK00 162 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 WWP2O00308 870 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MICAL3Q7RTP6 2002 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SCAIQ8N9R8 606 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 GPR156Q8NFN8 814 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 S100ZQ8WXG8 99 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MECRQ9BV79 373 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 C1QTNF7Q9BXJ2 289 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 POPDC2Q9HBU9 364 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 A0A088AWK7 358 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 KRT33AO76009 404 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ANXA5P08758 320 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 CTSEP14091 401 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ZNF10P21506 573 aaPredicted RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 AMIGO2Q86SJ2 522 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 UGT2B15P54855 530 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SYTL5Q8TDW5 730 aaPredicted RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 AP3S1Q92572 193 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 CERS2Q96G23 380 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 UNC5CO95185 931 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 AMPD2Q01433 879 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SPESP1Q6UW49 350 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 LENG1Q96BZ8 264 aaPredicted RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TNKS2Q9H2K2 1166 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 LEF1Q9UJU2 399 aaPredicted RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TTKP33981 857 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 BCAP31P51572 246 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 EARS2Q5JPH6 523 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 FBXO42Q6P3S6 717 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ABCG8Q9H221 673 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ING3Q9NXR8 418 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 NELL1Q92832 810 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ELOVL4Q9GZR5 314 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 FAM92AA1XBS5 289 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 LRATO95237 230 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TCF4P15884 667 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TAS2R41P59536 307 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 DEPDC4Q8N2C3 294 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 AADATQ8N5Z0 425 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 DUSP9Q99956 384 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 DNERQ8NFT8 737 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 GRIN3AQ8TCU5 1115 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SLC28A1O00337 649 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ENTPD5O75356 428 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 CASP5P51878 434 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SKP1P63208 163 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ZNF846Q147U1 533 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 RNASE12Q5GAN4 147 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TRAPPC12Q8WVT3 735 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 ZNHIT2Q9UHR6 403 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 OPLAHO14841 1288 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 DLG4P78352 724 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 TTC23Q5W5X9 447 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 C10orf107Q8IVU9 208 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 DAW1Q8N136 415 aa13.18□□□□□ -0.3
USP6NL-205ENST00000609104 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
USP6NL-205ENST00000609104 CCNYL3P0C7X3 344 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 PSME3P61289 254 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 ITPK1Q13572 414 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 ZNHIT3Q15649 155 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-205ENST00000609104 PCID2Q5JVF3 399 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 TAS2R14Q9NYV8 317 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 BUD31P41223 144 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-205ENST00000609104 IRF8Q02556 426 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 PCSK9Q8NBP7 692 aaKnown RBP13.17□□□□□ -0.3
USP6NL-205ENST00000609104 ABCC13Q9NSE7 274 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.35e-6■■■■□ 20.5
USP6NL-205ENST00000609104 TMCO1Q9UM00 188 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 OR10H3O60404 316 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 RGS20O76081 388 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 PPIL2Q13356 520 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 PTGR2Q8N8N7 351 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-205ENST00000609104 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 KLHL32Q96NJ5 620 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 LRMDAQ9H2I8 198 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 CPA4Q9UI42 421 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 NUMA1Q14980 2115 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-205ENST00000609104 SPATA5L1Q9BVQ7 753 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 EXO5Q9H790 373 aa13.17□□□□□ -0.3
USP6NL-205ENST00000609104 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
USP6NL-205ENST00000609104 MIIPQ5JXC2 388 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms