RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 SKILP12757 684 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
TOM1-218ENST00000608674 FANCCQ00597 558 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 DNAJC3Q13217 504 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 TDRD12Q587J7 1177 aaKnown RBP13.42□□□□□ -0.26
TOM1-218ENST00000608674 DHRS13Q6UX07 377 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 Q6ZSR6 202 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 TTC7BQ86TV6 843 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 VPS36Q86VN1 386 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 DNAAF5Q86Y56 855 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 NCAPGQ9BPX3 1015 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
TOM1-218ENST00000608674 TTYH3Q9C0H2 523 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 KLC2Q9H0B6 622 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 CCDC86Q9H6F5 360 aaKnown RBP13.42□□□□□ -0.26
TOM1-218ENST00000608674 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 MRPL47Q9HD33 250 aaKnown RBP13.42□□□□□ -0.26
TOM1-218ENST00000608674 MYO1AQ9UBC5 1043 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
TOM1-218ENST00000608674 IPO11Q9UI26 975 aaKnown RBP13.42□□□□□ -0.26
TOM1-218ENST00000608674 PCDHGA1Q9Y5H4 931 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 TMEM131Q92545 1883 aa13.42□□□□□ -0.26
TOM1-218ENST00000608674 ARHGAP42A6NI28 874 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 SRRM3A6NNA2 597 aaPredicted RBP13.41□□□□□ -0.26
TOM1-218ENST00000608674 FPGTO14772 594 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 RFPL3O75679 317 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 NDST2P52849 883 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 UBASH3AP57075 661 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 SMAD1Q15797 465 aaKnown RBP13.41□□□□□ -0.26
TOM1-218ENST00000608674 PPP6R3Q5H9R7 873 aaPredicted RBP13.41□□□□□ -0.26
TOM1-218ENST00000608674 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
TOM1-218ENST00000608674 GCNT7Q6ZNI0 430 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 ABI3BPQ7Z7G0 1075 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 TMPRSS12Q86WS5 348 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 FNIP1Q8TF40 1166 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 CELF6Q96J87 481 aaKnown RBP13.41□□□□□ -0.26
TOM1-218ENST00000608674 C1QTNF2Q9BXJ5 285 aa13.41□□□□□ -0.26
TOM1-218ENST00000608674 BZW2Q9Y6E2 419 aaKnown RBP13.41□□□□□ -0.26
TOM1-218ENST00000608674 TRPM6Q9BX84 2022 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 FAM149AA5PLN7 773 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 ALPPL2P10696 532 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 CKMT2P17540 419 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 PTMSP20962 102 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 DGKAP23743 735 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 MIPP30301 263 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 HNF1BP35680 557 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 ABL2P42684 1182 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 RABIFP47224 123 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 FGL2Q14314 439 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 GRM3Q14832 879 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 CA9Q16790 459 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 CFAP58Q5T655 872 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 KYAT3Q6YP21 454 aaKnown RBP13.4□□□□□ -0.26
TOM1-218ENST00000608674 RFX8Q6ZV50 586 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 PSTKQ8IV42 348 aaKnown RBP13.4□□□□□ -0.26
TOM1-218ENST00000608674 CXorf40AQ8TE69 158 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 IFT43Q96FT9 208 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 LENG8Q96PV6 779 aaPredicted RBP13.4□□□□□ -0.26
TOM1-218ENST00000608674 KCTD15Q96SI1 283 aaPredicted RBP13.4□□□□□ -0.26
TOM1-218ENST00000608674 SNRNP25Q9BV90 132 aaKnown RBP13.4□□□□□ -0.26
TOM1-218ENST00000608674 C1QTNF7Q9BXJ2 289 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 TRIM7Q9C029 511 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 LRRC19Q9H756 370 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 DNAJC28Q9NX36 388 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 DKK3Q9UBP4 350 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 ITM2BQ9Y287 266 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 MFHAS1Q9Y4C4 1052 aa13.4□□□□□ -0.26
TOM1-218ENST00000608674 DOCK9Q9BZ29 2069 aa13.4□□□□□ -0.27
TOM1-218ENST00000608674 ARID1BQ8NFD5 2236 aaPredicted RBP13.39□□□□□ -0.27
TOM1-218ENST00000608674 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 POM121BA6NF01 834 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 NEMP2A6NFY4 417 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 J3KR12 359 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 RAD51BO15315 384 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 FFAR2O15552 330 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 SIGLEC6O43699 453 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 PRAMEF11O60813 436 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 JUPP14923 745 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 ACADVLP49748 655 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 PAPOLAP51003 745 aaKnown RBP13.39□□□□□ -0.27
TOM1-218ENST00000608674 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
TOM1-218ENST00000608674 HNRNPKP61978 463 aaKnown RBP eCLIP13.39□□□□□ -0.27
TOM1-218ENST00000608674 DAB2P98082 770 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 ZNF211Q13398 564 aaPredicted RBP13.39□□□□□ -0.27
TOM1-218ENST00000608674 ILKQ13418 452 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 CYTH1Q15438 398 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 LRRC73Q5JTD7 316 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 KANSL1Q7Z3B3 1105 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 MARCH9Q86YJ5 346 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 SLC25A45Q8N413 288 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 ARFGAP1Q8N6T3 406 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 PAF1Q8N7H5 531 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
TOM1-218ENST00000608674 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
TOM1-218ENST00000608674 ASB12Q8WXK4 309 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms