RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FSCBQ5H9T9 825 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KIAA0930Q6ICG6 404 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TIFABQ6ZNK6 161 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RBM23Q86U06 439 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CNTN4Q8IWV2 1026 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 IFT43Q96FT9 208 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SGSM3Q96HU1 749 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CPNE1Q99829 537 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CAPS2Q9BXY5 557 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FBXO10Q9UK96 956 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RPL26L1Q9UNX3 145 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CCL26Q9Y258 94 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HS3ST2Q9Y278 367 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MUC22E2RYF6 1773 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CHD9Q3L8U1 2897 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 A0A1W2PPC1 479 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 F5H423 210 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MUSKO15146 869 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 USP12O75317 370 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SNRPAP09012 282 aaKnown RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ATXN1LP0C7T5 689 aaKnown RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KRT15P19012 456 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FSHRP23945 695 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MZF1P28698 734 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 POLD2P49005 469 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NTHL1P78549 312 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PDE1BQ01064 536 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ACVR1Q04771 509 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MSLNQ13421 630 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GRM3Q14832 879 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TERF2Q15554 542 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 UGP2Q16851 508 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CERCAMQ5T4B2 595 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ANKRD54Q6NXT1 300 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CAPN12Q6ZSI9 719 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KIAA0408Q6ZU52 694 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NPAS3Q8IXF0 933 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CALML6Q8TD86 181 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ACMSDQ8TDX5 336 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 WFIKKN2Q8TEU8 576 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 OSCP1Q8WVF1 389 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SMARCD2Q92925 531 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ASB16Q96NS5 453 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SMC6Q96SB8 1091 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TDRD1Q9BXT4 1180 aaKnown RBP12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TREX1Q9NSU2 369 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 UBP1Q9NZI7 540 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HACD3Q9P035 362 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ZFATQ9P243 1243 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 LHX3Q9UBR4 397 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CTNNAL1Q9UBT7 734 aa12.42□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 A0A1W2PQ67 120 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MROH6A6NGR9 719 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 EPOPA6NHQ4 379 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TM9SF1O15321 606 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SOCS5O75159 536 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CSPG5O95196 566 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NFATC1O95644 943 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GLP2RO95838 553 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ADH1CP00326 375 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GSRP00390 522 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 BRAFP15056 766 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 POU3F3P20264 500 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HPDP32754 393 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GP5P40197 560 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MAXP61244 160 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MTM1Q13496 603 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■■□ 25.5
NEDD8-MDP1-203ENST00000604306 PDGFRLQ15198 375 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PITRM1Q5JRX3 1037 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SIRPB2Q5JXA9 342 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GRTP1Q5TC63 336 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ZNF697Q5TEC3 545 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TRMT10BQ6PF06 316 aaKnown RBP12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NCEH1Q6PIU2 408 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TMC5Q6UXY8 1006 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CTAGE3PQ8IX95 158 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ADGRG2Q8IZP9 1017 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 AHI1Q8N157 1196 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RIN3Q8TB24 985 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ITFG1Q8TB96 612 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 WFDC5Q8TCV5 224 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 BRSK1Q8TDC3 778 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 BPIFB1Q8TDL5 484 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ISL2Q96A47 359 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ZSWIM3Q96MP5 696 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TUBGCP5Q96RT8 1024 aa12.41□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FAM167BQ9BTA0 163 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms