RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 TNFRSF21O75509 655 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PTENP60484 403 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 FMO1Q01740 532 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 IDI1Q13907 227 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 NKAPLQ5M9Q1 402 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SMYD1Q8NB12 490 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 TRIM38O00635 465 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PDHBP11177 359 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 NAMPTP43490 491 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 RNF212Q495C1 297 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ESRP1Q6NXG1 681 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 NKAPQ8N5F7 415 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 C2orf40Q9H1Z8 148 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SHOX2O60902 331 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 TLX1P31314 330 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 MNDAP41218 407 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 NAGLUP54802 743 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 TGM3Q08188 693 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SMU1Q2TAY7 513 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CENPLQ8N0S6 344 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 UBASH3BQ8TF42 649 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 DPF3Q92784 378 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 KIAA1683Q9H0B3 1180 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 C8orf33Q9H7E9 229 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 ATP2C1P98194 919 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 OTUD3Q5T2D3 398 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 CDYL2Q8N8U2 506 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PIGNO95427 931 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SPP1P10451 314 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ITGA8P53708 1063 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 RHDQ02161 417 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PPP1R3AQ16821 1122 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ATAD1Q8NBU5 361 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 C9orf72Q96LT7 481 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SETD4Q9NVD3 440 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 GMPR2Q9P2T1 348 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 DMGDHQ9UI17 866 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 NFAT5O94916 1531 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ZNF99A8MXY4 864 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 WNT7AO00755 349 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ITGAVP06756 1048 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CYP19A1P11511 503 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 HSD17B12Q53GQ0 312 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SPANXN3Q5MJ09 141 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ETNPPLQ8TBG4 499 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 TBCKQ8TEA7 893 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ZNF607Q96SK3 696 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 TOPORSQ9NS56 1045 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 VPS54Q9P1Q0 977 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 DNMT3LQ9UJW3 386 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 USP20Q9Y2K6 914 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 LOC100130705A0A1B0GUX0 176 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 E2F3O00716 465 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 HSPA12AO43301 675 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 URODP06132 367 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 AGKQ53H12 422 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 LINGO4Q6UY18 593 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 DDIASQ8IXT1 998 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 OXR1Q8N573 874 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 MYO19Q96H55 970 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PRDM5Q9NQX1 630 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 KCNH7Q9NS40 1196 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CTNND2Q9UQB3 1225 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PCYT1BQ9Y5K3 369 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 CLCA1A8K7I4 914 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 M0QZK8 103 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 DHX15O43143 795 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 GGCTO75223 188 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 BANF1O75531 89 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CCNDBP1O95273 360 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SEC24AO95486 1093 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 COL28A1Q2UY09 1125 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CMPK2Q5EBM0 449 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ANKS3Q6ZW76 656 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SAPCD2Q86UD0 394 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 KIF2BQ8N4N8 673 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CNTNAP3BQ96NU0 1288 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ZNF317Q96PQ6 595 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 SNX18Q96RF0 628 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PCDH12Q9NPG4 1184 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 GNA12Q03113 381 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PRPF38BQ5VTL8 546 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 CPT1BQ92523 772 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 MALSU1Q96EH3 234 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 GSX2Q9BZM3 304 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 TCF7L2Q9NQB0 619 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 TSR3Q9UJK0 312 aaKnown RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 PADI2Q9Y2J8 665 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 AP5Z1O43299 807 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 MAP3K6O95382 1288 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ETFBP38117 255 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 GIPRP48546 466 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 GMPSP49915 693 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 MERTKQ12866 999 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 POLD3Q15054 466 aaPredicted RBP3.42□□□□□ -1.86
NEB-218ENST00000603639 ZNF606Q8WXB4 792 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 CNKSR1Q969H4 720 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 SH2D3AQ9BRG2 576 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 ABCB11O95342 1321 aa3.42□□□□□ -1.86
NEB-218ENST00000603639 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms