RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF181Q2M3W8 571 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 PYHIN1Q6K0P9 492 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 C3orf33Q6P1S2 294 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 MAPKAPK5Q8IW41 473 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 MICALL2Q8IY33 904 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 MFSD4AQ8N468 514 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 LPCAT1Q8NF37 534 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 ZFAND1Q8TCF1 268 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 PNPT1Q8TCS8 783 aaKnown RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 SNAPC3Q92966 411 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 MSANTD3Q96H12 275 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 ZFYVE19Q96K21 471 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 RBM15Q96T37 977 aaKnown RBP eCLIP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 C19orf43Q9BQ61 176 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 LBHD1Q9BQE6 289 aaPredicted RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 ZNF251Q9BRH9 671 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 ANKHQ9HCJ1 492 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 DDX28Q9NUL7 540 aaKnown RBP8.96□□□□□ -0.97
COMMD3-215ENST00000602574 OLAHQ9NV23 265 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 CD300AQ9UGN4 299 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 ACSL5Q9ULC5 683 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 DENND2AQ9ULE3 1009 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 PCDHGB4Q9UN71 923 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 GRIP1Q9Y3R0 1128 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 PCDHGB5Q9Y5G0 923 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 PCDHA3Q9Y5H8 950 aa8.96□□□□□ -0.97
COMMD3-215ENST00000602574 NFAT5O94916 1531 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 LOC100653049A0A140TA62 436 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CARNS1A5YM72 827 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 LOC110117498-PIK3R3F6TDL0 507 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 TRIM38O00635 465 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 DNALI1O14645 258 aaPredicted RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 KIAA0391O15091 583 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 NUPL2O15504 423 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 KRT34O76011 436 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 RHOBTB1O94844 696 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 JUNP05412 331 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CDK1P06493 297 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CYP21A2P08686 494 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 JUNBP17275 347 aaPredicted RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 ITGA6P23229 1130 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 PTPREP23469 700 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 EIF4A3P38919 411 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 EIF2S3P41091 472 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 GSTM5P46439 218 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 YAP1P46937 504 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 RAP1GAPP47736 663 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 P2RY4P51582 365 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CCINQ13939 588 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 PITRM1Q5JRX3 1037 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 KIAA1755Q5JYT7 1200 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 TMEM81Q6P7N7 255 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 POTEAQ6S8J7 498 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 SLC9B2Q86UD5 537 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CCDC60Q8IWA6 550 aaPredicted RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 THNSL1Q8IYQ7 743 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 UBE2J2Q8N2K1 259 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 KDM1BQ8NB78 822 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 SLC37A3Q8NCC5 494 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 TRPV3Q8NET8 790 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 C7orf34Q96L11 122 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF597Q96LX8 424 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 TCEANC2Q96MN5 208 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 THTPAQ9BU02 230 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 ANKRD60Q9BZ19 345 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 NPHS2Q9NP85 383 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CMTM6Q9NX76 183 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 OR6C2Q9NZP2 312 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 ARMCX3Q9UH62 379 aaPredicted RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 CTNND2Q9UQB3 1225 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 MARF1Q9Y4F3 1742 aaKnown RBP8.96□□□□□ -0.98
COMMD3-215ENST00000602574 AP1M2Q9Y6Q5 423 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 DISP2A7MBM2 1401 aa8.96□□□□□ -0.98
COMMD3-215ENST00000602574 STK36Q9NRP7 1315 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 ARHGEF9O43307 516 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 CDC123O75794 336 aaPredicted RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 SCO1O75880 301 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 MBL2P11226 248 aaPredicted RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 HK1P19367 917 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 FBLN1P23142 703 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 ERP29P30040 261 aaKnown RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 AFMP43652 599 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 AFF1P51825 1210 aaKnown RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 GBX2P52951 348 aaPredicted RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 MRPS5P82675 430 aaKnown RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 CDH17Q12864 832 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 DPYDQ12882 1025 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 SGCGQ13326 291 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 DNASE1L3Q13609 305 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 RABGAP1LQ5R372 815 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 CYFIP1Q7L576 1253 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 NOXA1Q86UR1 476 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 ADGRG3Q86Y34 549 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 RASGRP4Q8TDF6 673 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 ATOH1Q92858 354 aaPredicted RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 RELTQ969Z4 430 aa8.95□□□□□ -0.98
COMMD3-215ENST00000602574 C18orf25Q96B23 403 aaPredicted RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 YTHDF1Q9BYJ9 559 aaKnown RBP8.95□□□□□ -0.98
COMMD3-215ENST00000602574 TM9SF3Q9HD45 589 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms