RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 IGSF6O95976 241 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 AGTP01019 485 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 CA4P22748 312 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 KDSRQ06136 332 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 EIF4HQ15056 248 aaKnown RBP22.85■■□□□ 1.25
IRF3-228ENST00000601291 ALS2CLQ60I27 953 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 TMEM215Q68D42 235 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 C22orf39Q6P5X5 142 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 RNF135Q8IUD6 432 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 PALM2Q8IXS6 379 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 NXPE3Q969Y0 559 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 TM6SF2Q9BZW4 377 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 MAD1L1Q9Y6D9 718 aa22.85■■□□□ 1.25
IRF3-228ENST00000601291 GJB3O75712 270 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SRPRAP08240 638 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 DLDP09622 509 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 CSNK1DP48730 415 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 NPY2RP49146 381 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SNRPD1P62314 119 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 SMAD2Q15796 467 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 LEXMQ3ZCV2 418 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 ACCSLQ4AC99 568 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SRLQ86TD4 932 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 PCDH20Q8N6Y1 951 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 FEM1CQ96JP0 617 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 RUFY1Q96T51 708 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 PIH1D1Q9NWS0 290 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 TIMM44O43615 452 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SASH3O75995 380 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 TSHRP16473 764 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 MGAT1P26572 445 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 PHBP35232 272 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 OPRD1P41143 372 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 VASPP50552 380 aaPredicted RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 ST8SIA6P61647 398 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 CDK18Q07002 472 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SLC29A2Q14542 456 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 AAK1Q2M2I8 961 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 ATXN7L2Q5T6C5 722 aaPredicted RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 CASC4Q6P4E1 433 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 NCEH1Q6PIU2 408 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 RANBP10Q6VN20 620 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 NUDT18Q6ZVK8 323 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 KDELC2Q7Z4H8 507 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 CCNJLQ8IV13 435 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 TERB1Q8NA31 727 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 OR2AP1Q8NGE2 309 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SIGLEC10Q96LC7 697 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 NAT9Q9BTE0 207 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 IL22Q9GZX6 179 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 EPB41L4BQ9H329 900 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 VPS37BQ9H9H4 285 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 ELOVL2Q9NXB9 296 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 SAMD15Q9P1V8 674 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 ZC3H7BQ9UGR2 993 aaKnown RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 FAM50BQ9Y247 325 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 PLAAQ9Y263 795 aa22.84■■□□□ 1.25
IRF3-228ENST00000601291 ARIH1Q9Y4X5 557 aaPredicted RBP22.84■■□□□ 1.25
IRF3-228ENST00000601291 GSRP00390 522 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 EPOP01588 193 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 NUDT17P0C025 328 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 HLA-DPA1P20036 260 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 CYB5D2Q8WUJ1 264 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 STAMBPL1Q96FJ0 436 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 EBNA1BP2Q99848 306 aaKnown RBP22.83■■□□□ 1.25
IRF3-228ENST00000601291 WDR83Q9BRX9 315 aaKnown RBP22.83■■□□□ 1.25
IRF3-228ENST00000601291 ARNT2Q9HBZ2 717 aa22.83■■□□□ 1.25
IRF3-228ENST00000601291 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.82■■□□□ 1.24
IRF3-228ENST00000601291 LOC285095A0A1B0GVY8 99 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 ATP9BO43861 1147 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 SPAG6O75602 509 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 ABHD2P08910 425 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 IHHQ14623 411 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 DLG2Q15700 870 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 SLC1A5Q15758 541 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 PUS10Q3MIT2 529 aaKnown RBP22.82■■□□□ 1.24
IRF3-228ENST00000601291 DGKKQ5KSL6 1271 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 IQCKQ8N0W5 287 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 AGGF1Q8N302 714 aaeCLIP22.82■■□□□ 1.24
IRF3-228ENST00000601291 MPP5Q8N3R9 675 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 PHTF2Q8N3S3 785 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 RYBPQ8N488 228 aaPredicted RBP22.82■■□□□ 1.24
IRF3-228ENST00000601291 UCMAQ8WVF2 138 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 TDRD1Q9BXT4 1180 aaKnown RBP22.82■■□□□ 1.24
IRF3-228ENST00000601291 TNKS2Q9H2K2 1166 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 KCNK12Q9HB15 430 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 LRRC4CQ9HCJ2 640 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 SYBUQ9NX95 663 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 SLCO3A1Q9UIG8 710 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 PLA2G4CQ9UP65 541 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 KIAA1549LQ6ZVL6 1849 aa22.82■■□□□ 1.24
IRF3-228ENST00000601291 TBC1D3BA6NDS4 549 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 ZNF821O75541 412 aaPredicted RBP22.81■■□□□ 1.24
IRF3-228ENST00000601291 RECQLP46063 649 aaPredicted RBP22.81■■□□□ 1.24
IRF3-228ENST00000601291 EIF3BP55884 814 aaKnown RBP22.81■■□□□ 1.24
IRF3-228ENST00000601291 IFFO1Q0D2I5 559 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 DENND5AQ6IQ26 1287 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 LRIG3Q6UXM1 1119 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 CAPN12Q6ZSI9 719 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms