RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ATXN7L2Q5T6C5 722 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 WDR59Q6PJI9 974 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 SPACA3Q8IXA5 215 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 IFI44Q8TCB0 444 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 FAM172AQ8WUF8 416 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 TBC1D31Q96DN5 1066 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 KLHL32Q96NJ5 620 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 KLC2Q9H0B6 622 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 NLRC4Q9NPP4 1024 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 FAM207AQ9NSI2 230 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 PTPRQQ9UMZ3 2332 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 A0A1W2PNU3 283 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 TK2O00142 265 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 KRIT1O00522 736 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 AQP9O43315 295 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 CSO75390 466 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 C1QL1O75973 258 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 PRB1P04280 392 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 MPOP05164 745 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 UGT2B4P06133 528 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 KRT3P12035 628 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 ITIH2P19823 946 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 TGM2P21980 687 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 LSSP48449 732 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 DUSP3P51452 185 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 SNRPD1P62314 119 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 CCDC173Q0VFZ6 552 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 POLD3Q15054 466 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 ZCCHC8Q6NZY4 707 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 PCSK4Q6UW60 755 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 TRIM72Q6ZMU5 477 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 PHF13Q86YI8 300 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 PYROXD2Q8N2H3 581 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 RYBPQ8N488 228 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 ZNF578Q96N58 590 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 FCRL3Q96P31 734 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 DEPDC7Q96QD5 511 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 TCEAL2Q9H3H9 227 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 SALL4Q9UJQ4 1053 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 BPTFQ12830 3046 aa18.25■□□□□ 0.51
CHMP2A-208ENST00000601220 CHD5Q8TDI0 1954 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 TRPM6Q9BX84 2022 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 EME2A4GXA9 379 aaPredicted RBP18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 TPP1O14773 563 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 USP12O75317 370 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 GCATO75600 419 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 TIMP2P16035 220 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 JUNDP17535 347 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 CLEC16AQ2KHT3 1053 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 GUSBP11Q6P575 273 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 GDPD4Q6W3E5 623 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 NETO2Q8NC67 525 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 BOCQ9BWV1 1114 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 OSBPL1AQ9BXW6 950 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 TTYH3Q9C0H2 523 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 ASCL3Q9NQ33 180 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 MBNL1Q9NR56 388 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 ADAM22Q9P0K1 906 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 IPO11Q9UI26 975 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 HPCAL4Q9UM19 191 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 MFHAS1Q9Y4C4 1052 aa18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 GCN1Q92616 2671 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-208ENST00000601220 SIGLEC16A6NMB1 481 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 H3BM21 787 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 NEMP1O14524 444 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 BUB1O43683 1085 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 MMP20O60882 483 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 TMCC1O94876 653 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 GPD1P21695 349 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 IGFALSP35858 605 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 STAT1P42224 750 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 GABREP78334 506 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 CDKN3Q16667 212 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 ISXQ2M1V0 245 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 DEFB133Q30KQ1 61 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 INO80DQ53TQ3 878 aaPredicted RBP18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 LRRC73Q5JTD7 316 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 MON1BQ7L1V2 547 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 SLFN11Q7Z7L1 901 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 TTC7BQ86TV6 843 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 RBFAQ8N0V3 343 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 RTL3Q8N8U3 475 aaKnown RBP18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 TP53I13Q8NBR0 393 aaPredicted RBP18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 LSM14AQ8ND56 463 aaKnown RBP18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 C3orf20Q8ND61 904 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 MAPK15Q8TD08 544 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 LMX1AQ8TE12 382 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 SLC39A7Q92504 469 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 POLR1BQ9H9Y6 1135 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 LMBRD1Q9NUN5 540 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 FANCLQ9NW38 375 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 DKK3Q9UBP4 350 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 DAAM1Q9Y4D1 1078 aa18.23■□□□□ 0.51
CHMP2A-208ENST00000601220 ZSCAN5CA6NGD5 496 aaPredicted RBP18.22■□□□□ 0.51
CHMP2A-208ENST00000601220 EIF4E1BA6NMX2 242 aaKnown RBP18.22■□□□□ 0.51
CHMP2A-208ENST00000601220 WASH4PA8MWX3 477 aa18.22■□□□□ 0.51
CHMP2A-208ENST00000601220 RIOK3O14730 519 aaKnown RBP18.22■□□□□ 0.51
CHMP2A-208ENST00000601220 CASC3O15234 703 aaKnown RBP18.22■□□□□ 0.51
CHMP2A-208ENST00000601220 INSIG1O15503 277 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms