RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 SRLQ86TD4 932 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 VSIG1Q86XK7 387 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 PGBD5Q8N414 524 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 CEP76Q8TAP6 659 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 LRIG1Q96JA1 1093 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 EDEM2Q9BV94 578 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 NUSAP1Q9BXS6 441 aaKnown RBP15.41■□□□□ 0.06
LIG1-219ENST00000600055 MAK16Q9BXY0 300 aaKnown RBP15.41■□□□□ 0.06
LIG1-219ENST00000600055 KDM4CQ9H3R0 1056 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 CAPN10Q9HC96 672 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 DTLQ9NZJ0 730 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 SEPT3Q9UH03 358 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 SLC6A14Q9UN76 642 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 ADGRG1Q9Y653 693 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 WDR87Q6ZQQ6 2873 aa15.41■□□□□ 0.06
LIG1-219ENST00000600055 PTPRZ1P23471 2315 aaPredicted RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 A0A1B0GTW7 788 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 A0A1W2PPC4 97 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 APOL1O14791 398 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 WNT9AO14904 365 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 BCAT2O15382 392 aaPredicted RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 RNGTTO60942 597 aaKnown RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 KRT10P13645 584 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 ITIH2P19823 946 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 CDKN2BP42772 138 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 SCNN1BP51168 640 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 MAXP61244 160 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 ZNF235Q14590 738 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 RSPO4Q2I0M5 234 aaPredicted RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 KAZNQ674X7 775 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 LAYNQ6UX15 382 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 SPOCD1Q6ZMY3 1216 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 CAMK1DQ8IU85 385 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 LRRC8AQ8IWT6 810 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 KATNAL2Q8IYT4 538 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 LRRC57Q8N9N7 239 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 KLK6Q92876 244 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 SLC6A18Q96N87 628 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 PSKH2Q96QS6 385 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 OSBPL1AQ9BXW6 950 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 CPEB1Q9BZB8 566 aaKnown RBP15.4■□□□□ 0.06
LIG1-219ENST00000600055 PREBQ9HCU5 417 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 TM9SF3Q9HD45 589 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 SUSD2Q9UGT4 822 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 GGT7Q9UJ14 662 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 ITM2BQ9Y287 266 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 HEY1Q9Y5J3 304 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 FADS3Q9Y5Q0 445 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 CFAP54Q96N23 3096 aa15.4■□□□□ 0.06
LIG1-219ENST00000600055 A0A1W2PQU0 124 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 PRR5-ARHGAP8B1AHC4 643 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 ARHGAP6O43182 974 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 SPINT1O43278 529 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 LATO43561 262 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 FOXD2O60548 495 aaPredicted RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 PCDH8O95206 1070 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 TIMP2P16035 220 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 ENGP17813 658 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 MMP13P45452 471 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 CSNK1DP48730 415 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 CSNK1EP49674 416 aaKnown RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 ARHGAP8P85298 464 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 CCZ1BP86790 482 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 CCZ1P86791 482 aaPredicted RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 BNC1Q01954 994 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 ADCY2Q08462 1091 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 NSUN2Q08J23 767 aaKnown RBP eCLIP15.39■□□□□ 0.05
LIG1-219ENST00000600055 CCDC15Q0P6D6 951 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 TAZQ16635 292 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 IFI16Q16666 785 aaKnown RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 MARC1Q5VT66 337 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 SEL1L3Q68CR1 1132 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 B4GALNT4Q76KP1 1039 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 RABEPKQ7Z6M1 372 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 TRIM69Q86WT6 500 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 LRRC49Q8IUZ0 686 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 CCDC112Q8NEF3 446 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 OR2I1PQ8NGU4 316 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 KIAA1524Q8TCG1 905 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 RMDN1Q96DB5 314 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 CALR3Q96L12 384 aaKnown RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 GTPBP2Q9BX10 602 aaKnown RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 SUV39H2Q9H5I1 410 aa15.39■□□□□ 0.05
LIG1-219ENST00000600055 ZFR2Q9UPR6 939 aaKnown RBP15.39■□□□□ 0.05
LIG1-219ENST00000600055 RALGAPA1Q6GYQ0 2036 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 A0A1B0GVT2 93 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 CDX4O14627 284 aaPredicted RBP15.38■□□□□ 0.05
LIG1-219ENST00000600055 MATN3O15232 486 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 ZRANB2O95218 330 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIG1-219ENST00000600055 CCNCP24863 283 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 CTNNA1P35221 906 aaKnown RBP15.38■□□□□ 0.05
LIG1-219ENST00000600055 MAPK8P45983 427 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 RENBPP51606 427 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 STPG1Q5TH74 334 aa15.38■□□□□ 0.05
LIG1-219ENST00000600055 TTC7BQ86TV6 843 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms