RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 RALGPS2Q86X27 583 aaPredicted RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 RYBPQ8N488 228 aaPredicted RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 OR2AP1Q8NGE2 309 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 CYB5D2Q8WUJ1 264 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 TADA1Q96BN2 335 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 LRRC39Q96DD0 335 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 FEM1CQ96JP0 617 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 TTC25Q96NG3 672 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 P2RY13Q9BPV8 354 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 TM6SF2Q9BZW4 377 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 NOD2Q9HC29 1040 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 CD320Q9NPF0 282 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 BFARQ9NZS9 450 aa15.64■□□□□ 0.09
UPF1-206ENST00000598471 ARIH1Q9Y4X5 557 aaPredicted RBP15.64■□□□□ 0.09
UPF1-206ENST00000598471 E7ESA3 106 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 SPECC1L-ADORA2AF8WAN1 911 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 MMP2P08253 660 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 GLULP15104 373 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 PMS2P54278 862 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 CBLBQ13191 982 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 TDGQ13569 410 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 GRM3Q14832 879 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 FNDC3BQ53EP0 1204 aaKnown RBP15.63■□□□□ 0.09
UPF1-206ENST00000598471 CARD16Q5EG05 197 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 SPDYCQ5MJ68 293 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 ATXN7L2Q5T6C5 722 aaPredicted RBP15.63■□□□□ 0.09
UPF1-206ENST00000598471 NCEH1Q6PIU2 408 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 TRMT10CQ7L0Y3 403 aaKnown RBP15.63■□□□□ 0.09
UPF1-206ENST00000598471 RNF135Q8IUD6 432 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 RELL1Q8IUW5 271 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 PLPP6Q8IY26 295 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 MREGQ8N565 214 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 MRGPRX3Q96LB0 322 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 MRGPRX2Q96LB1 330 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 PWWP2AQ96N64 755 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 TNKS2Q9H2K2 1166 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 ATP13A3Q9H7F0 1226 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 CASS4Q9NQ75 786 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 PRKAG3Q9UGI9 489 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 PIAS3Q9Y6X2 628 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 KIAA1549LQ6ZVL6 1849 aa15.63■□□□□ 0.09
UPF1-206ENST00000598471 LOC730098B7Z3J9 87 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 PRRT4C9JH25 899 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 NPC1O15118 1278 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 USP12O75317 370 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 CPP00450 1065 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 EPOP01588 193 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 ASGR2P07307 311 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 SRFP11831 508 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 HLA-DPA1P20036 260 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 CTHP32929 405 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 ADRA1AP35348 466 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 MAGEA3P43357 314 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 MAGEA4P43358 317 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 TNFRSF4P43489 277 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 SOX9P48436 509 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 NPY2RP49146 381 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 CDK18Q07002 472 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 BCL2L1Q07817 233 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 CCDC38Q502W7 563 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 DGKKQ5KSL6 1271 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 FNBP1LQ5T0N5 605 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 ZNF534Q76KX8 674 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 CAND1Q86VP6 1230 aaKnown RBP15.62■□□□□ 0.09
UPF1-206ENST00000598471 ADHFE1Q8IWW8 467 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 ZBED8Q8IZ13 594 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 PAF1Q8N7H5 531 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 OR52K1Q8NGK4 314 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 PYROXD1Q8WU10 500 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 SORCS1Q8WY21 1168 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 CHFRQ96EP1 664 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 TUBGCP5Q96RT8 1024 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 SAMD15Q9P1V8 674 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 HECAQ9UBI9 543 aaPredicted RBP15.62■□□□□ 0.09
UPF1-206ENST00000598471 SLCO3A1Q9UIG8 710 aa15.62■□□□□ 0.09
UPF1-206ENST00000598471 TTC24A2A3L6 582 aaPredicted RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 SDR42E2A6NKP2 422 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 ALOX15BO15296 676 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 BNIP3LO60238 219 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 SOCS5O75159 536 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 POP4O95707 220 aaKnown RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 NDST3O95803 873 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 AGTP01019 485 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 FGF1P05230 155 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 SERPINA4P29622 427 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 GRIA1P42261 906 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 GALK1P51570 392 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 SESN2P58004 480 aaPredicted RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 PTPRNQ16849 979 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 MYLK3Q32MK0 819 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 ARMC3Q5W041 872 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 RANBP10Q6VN20 620 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 Q6ZVU0 165 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 HDXQ7Z353 690 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 CCNJLQ8IV13 435 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 UBLCP1Q8WVY7 318 aaPredicted RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 APOL2Q9BQE5 337 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 NAT9Q9BTE0 207 aa15.61■□□□□ 0.09
UPF1-206ENST00000598471 TDRD1Q9BXT4 1180 aaKnown RBP15.61■□□□□ 0.09
UPF1-206ENST00000598471 ADGRE3Q9BY15 652 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms