RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 GRM3Q14832 879 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 GDPD4Q6W3E5 623 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 PAF1Q8N7H5 531 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 FAM71DQ8N9W8 422 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 NKD2Q969F2 451 aaPredicted RBP22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 TEKT5Q96M29 485 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 OMDQ99983 421 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 TMEM121Q9BTD3 319 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 CPEB1Q9BZB8 566 aaKnown RBP22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 USP29Q9HBJ7 922 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 NOD2Q9HC29 1040 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 SCML1Q9UN30 329 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 NCKAP1Q9Y2A7 1128 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 CFAP69A5D8W1 941 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 PIGNO95427 931 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 CR2P20023 1033 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 PAFAH1B1P43034 410 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 METAP1P53582 386 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 ZNF528Q3MIS6 628 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 USP39Q53GS9 565 aaKnown RBP22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 NCEH1Q6PIU2 408 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 WDR5BQ86VZ2 330 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 LONP2Q86WA8 852 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 CAMK1DQ8IU85 385 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 CREG2Q8IUH2 290 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 ZNF567Q8N184 647 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 HDDC3Q8N4P3 179 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 PRELID2Q8N945 189 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 RLN3Q8WXF3 142 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 PPP1R16AQ96I34 528 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 KLHL32Q96NJ5 620 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 TUBGCP5Q96RT8 1024 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 PRRX2Q99811 253 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 OSBPL1AQ9BXW6 950 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 FAM126AQ9BYI3 521 aaPredicted RBP22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 ATP13A3Q9H7F0 1226 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 GLOD4Q9HC38 313 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 ITM2CQ9NQX7 267 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 FBXL12Q9NXK8 326 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 TRHDEQ9UKU6 1024 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 CYP8B1Q9UNU6 501 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 INVSQ9Y283 1065 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 KMT2EQ8IZD2 1858 aa22.38■■□□□ 1.17
CHMP2A-204ENST00000597848 CCDC163A0A0D9SF12 145 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 GOLGA6L10A0A0M3HER8 536 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 A0A1W2PP55 124 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 PLK4O00444 970 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 ZNF217O75362 1048 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 RNASEH2AO75792 299 aaKnown RBP22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 SERPINA4P29622 427 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 TPMTP51580 245 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 BCL2L1Q07817 233 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 RALGPS1Q5JS13 557 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 CFAP58Q5T655 872 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 FAM124AQ86V42 546 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 MAGOHBQ96A72 148 aaKnown RBP22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 ARRDC3Q96B67 414 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 ZSCAN32Q9NX65 697 aa22.37■■□□□ 1.17
CHMP2A-204ENST00000597848 STIP1P31948 543 aaKnown RBP22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 NIPAL4Q0D2K0 466 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 OASLQ15646 514 aaKnown RBP22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 ZNF805Q5CZA5 627 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 ANKRD20A2Q5SQ80 823 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 ANKRD20A1Q5TYW2 823 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 ANKRD20A3Q5VUR7 823 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 DRICH1Q6PGQ1 229 aaPredicted RBP22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 AADATQ8N5Z0 425 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 ARRDC2Q8TBH0 407 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 ZNF641Q96N77 438 aaPredicted RBP22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 SLC25A51Q9H1U9 297 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 SUV39H2Q9H5I1 410 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 CD93Q9NPY3 652 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 RNF14Q9UBS8 474 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 RSPH14Q9UHP6 348 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 DRG1Q9Y295 367 aaKnown RBP22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 PCDHGC4Q9Y5F7 938 aa22.36■■□□□ 1.17
CHMP2A-204ENST00000597848 F5H423 210 aaPredicted RBP22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 H0Y858 1186 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 IFNB1P01574 187 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 ITGAVP06756 1048 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 SERPINF2P08697 491 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 NFKB1P19838 968 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 ITGB7P26010 798 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 CD86P42081 329 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 KCNJ1P48048 391 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 CCDC15Q0P6D6 951 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 CNTN1Q12860 1018 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 ALG1LQ6GMV1 187 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 ITPRIPL1Q6GPH6 555 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 USP30Q70CQ3 517 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 GSTA5Q7RTV2 222 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 CCDC110Q8TBZ0 833 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 PDCD6IPQ8WUM4 868 aaKnown RBP22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 SPACA7Q96KW9 195 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 NSMCE3Q96MG7 304 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 SPATA13Q96N96 652 aa22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 USP36Q9P275 1121 aaKnown RBP22.35■■□□□ 1.17
CHMP2A-204ENST00000597848 C5orf60A6NFR6 353 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms