RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SYCP2LQ5T4T6 812 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 GDPD4Q6W3E5 623 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 ERN2Q76MJ5 926 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 SLC41A1Q8IVJ1 513 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 RGL4Q8IZJ4 473 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 CADM4Q8NFZ8 388 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 LRRN4Q8WUT4 740 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 UBE2Q2Q8WVN8 375 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 SNX19Q92543 992 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 P3H4Q92791 437 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 RMDN1Q96DB5 314 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 ZNF419Q96HQ0 510 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 HES6Q96HZ4 224 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 KLHL32Q96NJ5 620 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 CPEB1Q9BZB8 566 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 OSBPL8Q9BZF1 889 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 PCED1AQ9H1Q7 454 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 ARRDC1-AS1Q9H2J1 176 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 HAUS2Q9NVX0 235 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 PCDHGA5Q9Y5G8 931 aa19.92■□□□□ 0.78
SHKBP1-214ENST00000597396 DDX3YO15523 660 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 ZSCAN12O43309 604 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 PYGMP11217 842 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 PTPN7P35236 360 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 SCNN1BP51168 640 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 NEK3P51956 506 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 ADPRHP54922 357 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 PPIDQ08752 370 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 NSUN2Q08J23 767 aaKnown RBP eCLIP19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 AP1B1Q10567 949 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 HNRNPDQ14103 355 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 ZNF805Q5CZA5 627 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 AGBL4Q5VU57 503 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 DCAF12L1Q5VU92 463 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 FBXL19Q6PCT2 694 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 NCEH1Q6PIU2 408 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 BBS12Q6ZW61 710 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 PAF1Q8N7H5 531 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 TRIM58Q8NG06 486 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 OR2T34Q8NGX1 318 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 PIGKQ92643 395 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 HAUS1Q96CS2 278 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 LGMNQ99538 433 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 HDAC8Q9BY41 377 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 C6orf106Q9H6K1 298 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 NT5MQ9NPB1 228 aa19.91■□□□□ 0.78
SHKBP1-214ENST00000597396 PLXNA2O75051 1894 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 BCLAF3A2AJT9 711 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 METTL12A8MUP2 240 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 MUSKO15146 869 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 PLRG1O43660 514 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 PIGNO95427 931 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 CCNB1P14635 433 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 PECAM1P16284 738 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 MPLP40238 635 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 DPP6P42658 865 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 MAPK8P45983 427 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 AP1S1P61966 158 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 ADCY2Q08462 1091 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 ITKQ08881 620 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 ZNF211Q13398 564 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 WDR45BQ5MNZ6 344 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 CFAP58Q5T655 872 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 PIP5KL1Q5T9C9 394 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 AADACL2Q6P093 401 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 PARS2Q7L3T8 475 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 MAML1Q92585 1016 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 FATE1Q969F0 183 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 FAM131CQ96AQ9 280 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 OLFM3Q96PB7 478 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 TUBGCP5Q96RT8 1024 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 MGME1Q9BQP7 344 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 BRD8Q9H0E9 1235 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 KDM4CQ9H3R0 1056 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 ATP13A3Q9H7F0 1226 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 SCUBE2Q9NQ36 999 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 RBM22Q9NW64 420 aaKnown RBP eCLIP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 SAE1Q9UBE0 346 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 EFR3BQ9Y2G0 817 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 TTLL3Q9Y4R7 772 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 WDR87Q6ZQQ6 2873 aa19.9■□□□□ 0.78
SHKBP1-214ENST00000597396 TBC1D3DA0A087WVF3 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3IA0A087WXS9 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3EA0A087X179 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3KA0A087X1G2 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3FA6NER0 549 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 C16orf96A6NNT2 1141 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3LB9A6J9 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 FSBPO95073 299 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3HP0C7X1 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 ADRB3P13945 408 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 ITPKAP23677 461 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 SERPINA4P29622 427 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 MAXP61244 160 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 BCL2L1Q07817 233 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 RPS6KA1Q15418 735 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 KIAA0895LQ68EN5 471 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3GQ6DHY5 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3CQ6IPX1 549 aa19.89■□□□□ 0.77
SHKBP1-214ENST00000597396 TBC1D3Q8IZP1 549 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms