RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 FAM46CQ5VWP2 391 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 CCDC137Q6PK04 289 aaKnown RBP9.42□□□□□ -0.9
ZNF548-206ENST00000597047 ARHGEF18Q6ZSZ5 1173 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 ZNF567Q8N184 647 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 RASGEF1CQ8N431 466 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 PRELID2Q8N945 189 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 MDGA1Q8NFP4 955 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 SPATA22Q8NHS9 363 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 ACTRT1Q8TDG2 376 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 MAML1Q92585 1016 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 ISG20Q96AZ6 181 aaKnown RBP9.42□□□□□ -0.9
ZNF548-206ENST00000597047 MRGPRX1Q96LB2 322 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 PSKH2Q96QS6 385 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 POLR1EQ9GZS1 481 aaKnown RBP9.42□□□□□ -0.9
ZNF548-206ENST00000597047 ATP13A3Q9H7F0 1226 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 GLOD4Q9HC38 313 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 CD93Q9NPY3 652 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 FBXL12Q9NXK8 326 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 ANKRD36A6QL64 1941 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 MUC22E2RYF6 1773 aaPredicted RBP9.42□□□□□ -0.9
ZNF548-206ENST00000597047 TTC28Q96AY4 2481 aa9.42□□□□□ -0.9
ZNF548-206ENST00000597047 BCLAF3A2AJT9 711 aaKnown RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 PDE2AO00408 941 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CES2O00748 559 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 NEMP1O14524 444 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 MTSS1O43312 755 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 MT-CYBP00156 380 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ADH1BP00325 375 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TUBB4AP04350 444 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ZSCAN5DPP0CG00 497 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CHRM1P11229 460 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CTPS1P17812 591 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ITIH2P19823 946 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 SERPINA4P29622 427 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 COILP38432 576 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 HSPA9P38646 679 aaKnown RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TNNT3P45378 269 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 EPHB1P54762 984 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 GDF10P55107 478 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 IFI35P80217 286 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 MRPS25P82663 173 aaKnown RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 C2orf54Q08AI8 447 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 SRSF5Q13243 272 aaKnown RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ENPP2Q13822 863 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 PRPSAP1Q14558 356 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ELAVL3Q14576 367 aaKnown RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 SIX1Q15475 284 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TTC31Q49AM3 519 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ITPRIPL1Q6GPH6 555 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 FBXL19Q6PCT2 694 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 NCEH1Q6PIU2 408 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CEP68Q76N32 757 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TTC7BQ86TV6 843 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CREG2Q8IUH2 290 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 FAM160A2Q8N612 972 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TEX26Q8N6G2 289 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CNTD1Q8N815 330 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 FRMD1Q8N878 549 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 OR14C36Q8NHC7 312 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 SLC35B2Q8TB61 432 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ARRDC3Q96B67 414 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TEKT5Q96M29 485 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 NUDCD1Q96RS6 583 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 IL12RB2Q99665 862 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 FRMD8P1Q9BZ68 369 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 DDX47Q9H0S4 455 aaKnown RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 RSPH9Q9H1X1 276 aaPredicted RBP9.41□□□□□ -0.9
ZNF548-206ENST00000597047 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 HOMER3Q9NSC5 361 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TRHDEQ9UKU6 1024 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 CHKBQ9Y259 395 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3DA0A087WVF3 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3IA0A087WXS9 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3EA0A087X179 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3KA0A087X1G2 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 CFAP69A5D8W1 941 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3FA6NER0 549 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3LB9A6J9 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 E7EVH7 732 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 K7ESF4 209 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PHF2O75151 1096 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 NDUFS2O75306 463 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PCDH8O95206 1070 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 KRT14P02533 472 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 SERPINF2P08697 491 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3HP0C7X1 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PSMB4P28070 264 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 VASPP50552 380 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 FAM193AP78312 1265 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 ZNF33AQ06730 810 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 NSUN2Q08J23 767 aaKnown RBP eCLIP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 CNTN1Q12860 1018 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 SFSWAPQ12872 951 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms