RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CYP1B1Q16678 543 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 POM121L1PQ3SYA9 428 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 ODF2Q5BJF6 829 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 SEL1L2Q5TEA6 688 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 AGBL4Q5VU57 503 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 ZNF776Q68DI1 518 aaPredicted RBP10.7□□□□□ -0.7
LIG1-210ENST00000596332 TIGD7Q6NT04 549 aaPredicted RBP10.7□□□□□ -0.7
LIG1-210ENST00000596332 DRICH1Q6PGQ1 229 aaPredicted RBP10.7□□□□□ -0.7
LIG1-210ENST00000596332 SYT10Q6XYQ8 523 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 BZW1Q7L1Q6 419 aaKnown RBP10.7□□□□□ -0.7
LIG1-210ENST00000596332 PRUNE1Q86TP1 453 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 HTR3CQ8WXA8 447 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 OR8D1Q8WZ84 308 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 IMP4Q96G21 291 aaKnown RBP10.7□□□□□ -0.7
LIG1-210ENST00000596332 SMIM14Q96QK8 99 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 TRIB3Q96RU7 358 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
LIG1-210ENST00000596332 ORAI3Q9BRQ5 295 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 EBF2Q9HAK2 575 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 ZSCAN32Q9NX65 697 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 IL36AQ9UHA7 158 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 PCDHGC4Q9Y5F7 938 aa10.7□□□□□ -0.7
LIG1-210ENST00000596332 MUC6Q6W4X9 2439 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 C5orf60A6NFR6 353 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 C16orf96A6NNT2 1141 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 KRIT1O00522 736 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 PPP1R12AO14974 1030 aaPredicted RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 IL1BP01584 269 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 PDHA1P08559 390 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 ETS1P14921 441 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 C5AR1P21730 350 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 HSPA9P38646 679 aaKnown RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 ABL2P42684 1182 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 KCNJ1P48048 391 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 PSMD8P48556 350 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 SCNN1BP51168 640 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 KDELC1Q6UW63 502 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 GDPD4Q6W3E5 623 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 USP30Q70CQ3 517 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 PARS2Q7L3T8 475 aaKnown RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 CACUL1Q86Y37 369 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 SLC41A1Q8IVJ1 513 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 CBARPQ8N350 705 aaPredicted RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 TTC13Q8NBP0 860 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 SPATA22Q8NHS9 363 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 GRIN3AQ8TCU5 1115 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 HCAR2Q8TDS4 363 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 PIH1D2Q8WWB5 315 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 PRCCQ92733 491 aaPredicted RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 OXNAD1Q96HP4 312 aaPredicted RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 LRIG1Q96JA1 1093 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 GDAP1L1Q96MZ0 367 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 KLHL32Q96NJ5 620 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 SEMA3CQ99985 751 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 TMEM121Q9BTD3 319 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 CINPQ9BW66 212 aaPredicted RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 HDAC8Q9BY41 377 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 FAM126AQ9BYI3 521 aaPredicted RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 SUV39H2Q9H5I1 410 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 ZDHHC6Q9H6R6 413 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 GLOD4Q9HC38 313 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 DKK3Q9UBP4 350 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 GGT7Q9UJ14 662 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 DRG1Q9Y295 367 aaKnown RBP10.69□□□□□ -0.7
LIG1-210ENST00000596332 PPIL1Q9Y3C6 166 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 SLCO1B1Q9Y6L6 691 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 R4GN57 208 aa10.69□□□□□ -0.7
LIG1-210ENST00000596332 FANCMQ8IYD8 2048 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 A0A1W2PP55 124 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 CTAGE9A4FU28 777 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 H7C0C1 242 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 AREL1O15033 823 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 GCATO75600 419 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ALDH1A2O94788 518 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 METTL18O95568 372 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 IGSF6O95976 241 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ADH1BP00325 375 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 PRNPP04156 253 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 UGT2B4P06133 528 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 GM2AP17900 193 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 NFKB1P19838 968 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ITGB7P26010 798 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 CETN2P41208 172 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ATP5OP48047 213 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 MSLNQ13421 630 aaPredicted RBP10.68□□□□□ -0.7
LIG1-210ENST00000596332 SNX1Q13596 522 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
LIG1-210ENST00000596332 CDKN3Q16667 212 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 LONRF2Q1L5Z9 754 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ZNF805Q5CZA5 627 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 RALGPS1Q5JS13 557 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ANKRD20A2Q5SQ80 823 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ANKRD20A1Q5TYW2 823 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 ANKRD20A3Q5VUR7 823 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 DARS2Q6PI48 645 aaKnown RBP10.68□□□□□ -0.7
LIG1-210ENST00000596332 KIAA1324Q6UXG2 1013 aaKnown RBP10.68□□□□□ -0.7
LIG1-210ENST00000596332 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.68□□□□□ -0.7
LIG1-210ENST00000596332 HDDC3Q8N4P3 179 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 FAM71DQ8N9W8 422 aa10.68□□□□□ -0.7
LIG1-210ENST00000596332 C12orf50Q8NA57 414 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms