RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TSEN2Q8NCE0 465 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 RAPGEF5Q92565 580 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 FAF2Q96CS3 445 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 KLHL32Q96NJ5 620 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 ZDHHC5Q9C0B5 715 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 SP110Q9HB58 689 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 LCMT1Q9UIC8 334 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 ITM2BQ9Y287 266 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 ANKRD6Q9Y2G4 727 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 FNDC3AQ9Y2H6 1198 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 SNX11Q9Y5W9 270 aa11.14□□□□□ -0.63
SHKBP1-206ENST00000595523 ASPMQ8IZT6 3477 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 A0A1W2PQU0 124 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 C3orf70A6NLC5 250 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 GIPC1O14908 333 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 VILLO15195 856 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 BUB1BO60566 1050 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 MAFKO60675 156 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 OPHN1O60890 802 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PALMO75781 387 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 KCNK5O95279 499 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PIGNO95427 931 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PRLRP16471 622 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 ARHGAP25P42331 645 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 CTSKP43235 329 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 ATXN3P54252 364 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC10A7Q0GE19 358 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 FGL2Q14314 439 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PDK2Q15119 407 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 HLA-BQ31612 363 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 ANKRD20A8PQ5CZ79 823 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PPM1JQ5JR12 505 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 LRRC73Q5JTD7 316 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 NAPEPLDQ6IQ20 393 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 NEK5Q6P3R8 708 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 FBXL19Q6PCT2 694 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 GDPD4Q6W3E5 623 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 RAD9BQ6WBX8 426 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 ZSWIM9Q86XI8 627 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 TMEM139Q8IV31 216 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 CCDC170Q8IYT3 715 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PQLC3Q8N755 202 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 TMEM145Q8NBT3 493 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 KLK6Q92876 244 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 SERAC1Q96JX3 654 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 CALN1Q9BXU9 219 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 OSBPL1AQ9BXW6 950 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 CPEB1Q9BZB8 566 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 GOLPH3Q9H4A6 298 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 GAREM1Q9H706 876 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 TPX2Q9ULW0 747 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 CA5BQ9Y2D0 317 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 REXO2Q9Y3B8 237 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PCDHA13Q9Y5I0 950 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 FADS3Q9Y5Q0 445 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 WDFY3Q8IZQ1 3526 aa11.13□□□□□ -0.63
SHKBP1-206ENST00000595523 PTPRBP23467 1997 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 COL5A1P20908 1838 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 MAP1BP46821 2468 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 TSPAN11A1L157 253 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 RCCD1A6NED2 376 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 UPK3BL1B0FP48 263 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 UPK3BL2E5RIL1 263 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 KCNK3O14649 394 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 AREL1O15033 823 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 AP1G1O43747 822 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 NDUFA10O95299 355 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 MAP3K6O95382 1288 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 KRT7P08729 469 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 ITIH2P19823 946 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 KDELR1P24390 212 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 CD38P28907 300 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 CDC25BP30305 580 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 MAGEA1P43355 309 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 CSNK1DP48730 415 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 SLC10A2Q12908 348 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 RFTN1Q14699 578 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 LBRQ14739 615 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 PAFAH1B3Q15102 231 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 TEAD4Q15561 434 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 SETMARQ53H47 684 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 TMCO4Q5TGY1 634 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 SRLQ86TD4 932 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 PRPF39Q86UA1 669 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 PGBD5Q8N414 524 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 KCTD6Q8NC69 237 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 ZNF599Q96NL3 588 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 PSKH2Q96QS6 385 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 CINPQ9BW66 212 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 FZD3Q9NPG1 666 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 AASDHPPTQ9NRN7 309 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 DKK3Q9UBP4 350 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 SALL4Q9UJQ4 1053 aa11.12□□□□□ -0.63
SHKBP1-206ENST00000595523 DMTF1Q9Y222 760 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms