RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 PAFAH1B1P43034 410 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 AP1S1P61966 158 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 DMWDQ09019 674 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 RALGPS1Q5JS13 557 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 ANKRD20A2Q5SQ80 823 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 ANKRD20A1Q5TYW2 823 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 ANKRD20A3Q5VUR7 823 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 CACUL1Q86Y37 369 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 PRCCQ92733 491 aaPredicted RBP22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 MAGOHBQ96A72 148 aaKnown RBP22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 SCUBE2Q9NQ36 999 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 KLHL8Q9P2G9 620 aaPredicted RBP22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 FBXO4Q9UKT5 387 aa22.82■■□□□ 1.24
SNRNP70-204ENST00000595231 URI1O94763 535 aaPredicted RBP22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 MMP2P08253 660 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 SLC8A1P32418 973 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 ZBTB16Q05516 673 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 RAD51Q06609 339 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 KIF18AQ8NI77 898 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 CCDC110Q8TBZ0 833 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 SPATA13Q96N96 652 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 GLOD4Q9HC38 313 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 HAUS2Q9NVX0 235 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 CDC23Q9UJX2 597 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 ANKRD36A6QL64 1941 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 MID1O15344 667 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 GCATO75600 419 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 PIGNO95427 931 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 CES1P23141 567 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 MAPK8P45983 427 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 PSMD8P48556 350 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 CSTF1Q05048 431 aaKnown RBP22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 PRPF39Q86UA1 669 aaKnown RBP22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 CAMK1DQ8IU85 385 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 PGBD3Q8N328 593 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 IMP4Q96G21 291 aaKnown RBP22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 TUBGCP5Q96RT8 1024 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 SLC25A51Q9H1U9 297 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 CD93Q9NPY3 652 aa22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 BCCIPQ9P287 314 aaKnown RBP eCLIP22.81■■□□□ 1.24
SNRNP70-204ENST00000595231 GOLGA6L10A0A0M3HER8 536 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 TRAFD1O14545 582 aaPredicted RBP22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 PHF2O75151 1096 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 ADH1BP00325 375 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 UGT2B4P06133 528 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 NFKB1P19838 968 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 C5AR1P21730 350 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 COILP38432 576 aaPredicted RBP22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 NUBP1P53384 320 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 GRM3Q14832 879 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 POM121L1PQ3SYA9 428 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 KIAA1324Q6UXG2 1013 aaKnown RBP22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 GDPD4Q6W3E5 623 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 AADATQ8N5Z0 425 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 GLIS1Q8NBF1 620 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 ATL2Q8NHH9 583 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 TADA1Q96BN2 335 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 OSBPL1AQ9BXW6 950 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 TPSD1Q9BZJ3 242 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 ITM2CQ9NQX7 267 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 PCDHGC4Q9Y5F7 938 aa22.8■■□□□ 1.24
SNRNP70-204ENST00000595231 CCDC163A0A0D9SF12 145 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 C1QTNF3-AMACRE9PGA6 284 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 KPNA3O00505 521 aaPredicted RBP22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 STK10O94804 968 aaKnown RBP22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 DNTTP04053 509 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 DRD3P35462 400 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 SKOR1P84550 965 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 ANGPT1Q15389 498 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 FAM46CQ5VWP2 391 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 CCDC137Q6PK04 289 aaKnown RBP22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 PRUNE1Q86TP1 453 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 SPATA22Q8NHS9 363 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 NELL1Q92832 810 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 ARRDC3Q96B67 414 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 ZNF641Q96N77 438 aaPredicted RBP22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 KLHL32Q96NJ5 620 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 GORASP1Q9BQQ3 440 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 PABPC3Q9H361 631 aaKnown RBP22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 SUV39H2Q9H5I1 410 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 ATP13A3Q9H7F0 1226 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 USP36Q9P275 1121 aaKnown RBP22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 SCML1Q9UN30 329 aa22.79■■□□□ 1.24
SNRNP70-204ENST00000595231 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 GALR2O43603 387 aaPredicted RBP22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 OPHN1O60890 802 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 ETS1P14921 441 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 CD86P42081 329 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 BCL2L1Q07817 233 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 KCTD19Q17RG1 926 aaPredicted RBP22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 P3H1Q32P28 736 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 ZNF805Q5CZA5 627 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 FCRL5Q96RD9 977 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 RBM15Q96T37 977 aaKnown RBP eCLIP22.78■■□□□ 1.242e-12■■□□□ 13.6
SNRNP70-204ENST00000595231 DDX47Q9H0S4 455 aaKnown RBP22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 GBA3Q9H227 469 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 SERGEFQ9UGK8 458 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 EML5Q05BV3 1969 aa22.78■■□□□ 1.24
SNRNP70-204ENST00000595231 AXIN1O15169 862 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms