RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 DAAM2Q86T65 1068 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 TRIM69Q86WT6 500 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 LRRC49Q8IUZ0 686 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 RMDN1Q96DB5 314 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 KLHL32Q96NJ5 620 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 PSKH2Q96QS6 385 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 CPEB1Q9BZB8 566 aaKnown RBP14.75□□□□□ -0.05
VRK3-206ENST00000594090 EBF2Q9HAK2 575 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 GRPEL1Q9HAV7 217 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 TM9SF3Q9HD45 589 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 SEPT3Q9UH03 358 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 ZNF292O60281 2723 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 SHROOM3Q8TF72 1996 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 PTPRZ1P23471 2315 aaPredicted RBP14.75□□□□□ -0.05
VRK3-206ENST00000594090 C16orf96A6NNT2 1141 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 MUSKO15146 869 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 PIGNO95427 931 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 ABL2P42684 1182 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 CSNK1DP48730 415 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 NAP1L1P55209 391 aaKnown RBP14.75□□□□□ -0.05
VRK3-206ENST00000594090 ZNF235Q14590 738 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 GRM3Q14832 879 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 SLC9A4Q6AI14 798 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 FBXL19Q6PCT2 694 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 TXLNBQ8N3L3 684 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 PLD5Q8N7P1 536 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.75□□□□□ -0.05
VRK3-206ENST00000594090 RNF25Q96BH1 459 aaPredicted RBP14.75□□□□□ -0.05
VRK3-206ENST00000594090 DTLQ9NZJ0 730 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 TRIM10Q9UDY6 481 aa14.75□□□□□ -0.05
VRK3-206ENST00000594090 ADAMTS9Q9P2N4 1935 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 DCHS1Q96JQ0 3298 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 A0A0U1RQJ8 604 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 GRID2IPA4D2P6 1211 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 AP1G1O43747 822 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 RNGTTO60942 597 aaKnown RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 GJB3O75712 270 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 SYPP08247 313 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 SDHBP21912 280 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 MAT2AP31153 395 aaKnown RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 PI4KAP42356 2102 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 MARCKSL1P49006 195 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 RENBPP51606 427 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 AFF3P51826 1226 aaKnown RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
VRK3-206ENST00000594090 SLC10A2Q12908 348 aaPredicted RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 GRIK2Q13002 908 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 IFI16Q16666 785 aaKnown RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 STPG1Q5TH74 334 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 TIGD7Q6NT04 549 aaPredicted RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 NEK5Q6P3R8 708 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 MFSD7Q6UXD7 560 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 SRLQ86TD4 932 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 PRPF39Q86UA1 669 aaKnown RBP14.74□□□□□ -0.05
VRK3-206ENST00000594090 RFX6Q8HWS3 928 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 KATNAL2Q8IYT4 538 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 NSMCE1Q8WV22 266 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 RAB7BQ96AH8 199 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 HDAC11Q96DB2 347 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 SLC6A18Q96N87 628 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 TUBGCP5Q96RT8 1024 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 MGME1Q9BQP7 344 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 TMEM9BQ9NQ34 198 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 DLL3Q9NYJ7 618 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 DKK3Q9UBP4 350 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 FADS3Q9Y5Q0 445 aa14.74□□□□□ -0.05
VRK3-206ENST00000594090 A0A1W2PQU0 124 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 GOLGA6L3A6NEY3 463 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 ARHGAP33O14559 1287 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 CDX4O14627 284 aaPredicted RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 APOL1O14791 398 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 SLC30A4O14863 429 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 ARHGAP6O43182 974 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 SPINT1O43278 529 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 PCDH8O95206 1070 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 MX2P20592 715 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 CTNNA1P35221 906 aaKnown RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 NUDT1P36639 197 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 HSPA9P38646 679 aaKnown RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 CDKN2BP42772 138 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 MMP13P45452 471 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 MAPK8P45983 427 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 GRIA4P48058 902 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 RACK1P63244 317 aaKnown RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 KIF5AQ12840 1032 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 TEAD4Q15561 434 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 TAZQ16635 292 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 SETMARQ53H47 684 aaPredicted RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 LAYNQ6UX15 382 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 SPOCD1Q6ZMY3 1216 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 HORMAD1Q86X24 394 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 BBS5Q8N3I7 341 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 PGBD5Q8N414 524 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 LRRC57Q8N9N7 239 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 MAML1Q92585 1016 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 KRT35Q92764 455 aa14.73□□□□□ -0.05
VRK3-206ENST00000594090 ZNF641Q96N77 438 aaPredicted RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 ZNF830Q96NB3 372 aaPredicted RBP14.73□□□□□ -0.05
VRK3-206ENST00000594090 TSGA13Q96PP4 275 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms