RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SCYL2Q6P3W7 929 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 DCUN1D2Q6PH85 259 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 HORMAD1Q86X24 394 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 RTL3Q8N8U3 475 aaKnown RBP13.43□□□□□ -0.26
H3F3B-213ENST00000593254 TMEM145Q8NBT3 493 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 RFFLQ8WZ73 363 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 PPP1R16AQ96I34 528 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
H3F3B-213ENST00000593254 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 TTYH3Q9C0H2 523 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 NOL6Q9H6R4 1146 aaKnown RBP13.43□□□□□ -0.26
H3F3B-213ENST00000593254 ERVMER34-1Q9H9K5 563 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 AIPL1Q9NZN9 384 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 FZD10Q9ULW2 581 aa13.43□□□□□ -0.26
H3F3B-213ENST00000593254 FLNCQ14315 2725 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 A0A1W2PQU0 124 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 PRAMEF26H0Y7S4 382 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 MAGEC1O60732 1142 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ITGAVP06756 1048 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 EPHA8P29322 1005 aaPredicted RBP13.42□□□□□ -0.26
H3F3B-213ENST00000593254 EPHB2P29323 1055 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ACTN2P35609 894 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 PRKCIP41743 596 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 RXRGP48443 463 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ARRB1P49407 418 aaPredicted RBP13.42□□□□□ -0.26
H3F3B-213ENST00000593254 DNA2P51530 1060 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 NEK3P51956 506 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ILKQ13418 452 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 MAMLD1Q13495 774 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 STAT4Q14765 748 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 POLD3Q15054 466 aaPredicted RBP13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ASIC2Q16515 512 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ZNF284Q2VY69 593 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 PLEKHA7Q6IQ23 1121 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 TMC6Q7Z403 805 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 SPATS2Q86XZ4 545 aaKnown RBP13.42□□□□□ -0.26
H3F3B-213ENST00000593254 OXR1Q8N573 874 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 EPAS1Q99814 870 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 CLMPQ9H6B4 373 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 HAUS4Q9H6D7 363 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 HECAQ9UBI9 543 aaPredicted RBP13.42□□□□□ -0.26
H3F3B-213ENST00000593254 HPCAL4Q9UM19 191 aa13.42□□□□□ -0.26
H3F3B-213ENST00000593254 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
H3F3B-213ENST00000593254 WASH4PA8MWX3 477 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 TMCO5BA8MYB1 307 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 KDELR3O43731 214 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 CREB3O43889 395 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 GSRP00390 522 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 GZMAP12544 262 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 ADRB3P13945 408 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 PRLRP16471 622 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 DESP17661 470 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 RHDQ02161 417 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 KLHL40Q2TBA0 621 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 TMEM259Q4ZIN3 620 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 TAF1BQ53T94 588 aaPredicted RBP13.41□□□□□ -0.26
H3F3B-213ENST00000593254 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 SFMBT2Q5VUG0 894 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 ZNF571Q7Z3V5 609 aaPredicted RBP13.41□□□□□ -0.26
H3F3B-213ENST00000593254 EID2Q8N6I1 236 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 DCBLD1Q8N8Z6 715 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 OR2AP1Q8NGE2 309 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 VOPP1Q96AW1 172 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 SEMA4CQ9C0C4 833 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 PARVAQ9NVD7 372 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 ZFR2Q9UPR6 939 aaKnown RBP13.41□□□□□ -0.26
H3F3B-213ENST00000593254 CA5BQ9Y2D0 317 aa13.41□□□□□ -0.26
H3F3B-213ENST00000593254 SLC31A1O15431 190 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 AP1G1O43747 822 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 PCDH8O95206 1070 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 HNRNPA2B1P22626 353 aaKnown RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 HTR7P34969 479 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 YBEYP58557 167 aaPredicted RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 SNRPD1P62314 119 aaKnown RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 NR1I3Q14994 352 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 INO80DQ53TQ3 878 aaPredicted RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 SEL1L3Q68CR1 1132 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 LEKR1Q6ZMV7 388 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 KANSL1Q7Z3B3 1105 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 UMODL1-AS1Q8N2C9 162 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 CASKIN2Q8WXE0 1202 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 KLK6Q92876 244 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 MYOCQ99972 504 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 CATSPERBQ9H7T0 1116 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 CBX8Q9HC52 389 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 CLCA2Q9UQC9 943 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 FADS3Q9Y5Q0 445 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 ANKRD36A6QL64 1941 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 LRRK1Q38SD2 2015 aa13.4□□□□□ -0.26
H3F3B-213ENST00000593254 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
H3F3B-213ENST00000593254 SYCE3A1L190 88 aa13.39□□□□□ -0.27
H3F3B-213ENST00000593254 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
H3F3B-213ENST00000593254 EIF3CLB5ME19 914 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms