RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SEPT6Q14141 434 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 POLD3Q15054 466 aaPredicted RBP19.91■□□□□ 0.78
CLIP3-206ENST00000593074 WASHC2DQ5SRD0 308 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 RINLQ6ZS11 566 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 MFSD6LQ8IWD5 586 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 TMEM151AQ8N4L1 468 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 SREK1Q8WXA9 508 aaKnown RBP19.91■□□□□ 0.78
CLIP3-206ENST00000593074 IGSF21Q96ID5 467 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 CEP295NLQ96MC4 621 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 RILPQ96NA2 401 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 CRISPLD2Q9H0B8 497 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 TAS2R1Q9NYW7 299 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 ZNF195O14628 629 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 GSC2O15499 205 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 RPL17P18621 184 aaKnown RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 SERPINH1P50454 418 aaKnown RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 YBEYP58557 167 aaPredicted RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 DSC2Q02487 901 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 THOC5Q13769 683 aaKnown RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 IHHQ14623 411 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 E2F5Q15329 346 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 RABGAP1LQ5R372 815 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 C1orf53Q5VUE5 145 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 ZNF470Q6ECI4 717 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 NAPRTQ6XQN6 538 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 CIR1Q86X95 450 aaPredicted RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 SLC41A1Q8IVJ1 513 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 NSMCE1Q8WV22 266 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 ACE2Q9BYF1 805 aaPredicted RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 MMADHCQ9H3L0 296 aaPredicted RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 TMEM39AQ9NV64 488 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 PNPOQ9NVS9 261 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 OXSMQ9NWU1 459 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 ATP11BQ9Y2G3 1177 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 L3MBTL1Q9Y468 752 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 FAM95CA0A1B0GW59 222 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 PHGDHO43175 533 aaKnown RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 TRIM13O60858 407 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 ALDH18A1P54886 795 aaKnown RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 RAB10P61026 200 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 ZYG11AQ6WRX3 759 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 KIAA0408Q6ZU52 694 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 CENPLQ8N0S6 344 aaPredicted RBP19.9■□□□□ 0.78
CLIP3-206ENST00000593074 PGBD5Q8N414 524 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 SLC25A41Q8N5S1 370 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 ARRDC2Q8TBH0 407 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 MYEOVQ96EZ4 313 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 TASP1Q9H6P5 420 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 EBF2Q9HAK2 575 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 TBX21Q9UL17 535 aa19.9■□□□□ 0.78
CLIP3-206ENST00000593074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 TK2O00142 265 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 PAPSS2O95340 614 aaPredicted RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 SBK3P0C264 359 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 EZRP15311 586 aaKnown RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 GM2AP17900 193 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 AOC1P19801 751 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 TACR2P21452 398 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 CD151P48509 253 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 ITKQ08881 620 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 C5orf22Q49AR2 442 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 SPOUT1Q5T280 376 aaKnown RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 TSTD2Q5T7W7 516 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 SNX30Q5VWJ9 437 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 RNF168Q8IYW5 571 aaPredicted RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 TEX9Q8N6V9 391 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 TSNARE1Q96NA8 513 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 CDK5RAP1Q96SZ6 601 aaKnown RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 VN1R3Q9BXE9 311 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 DENND2DQ9H6A0 471 aaPredicted RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.89■□□□□ 0.77
CLIP3-206ENST00000593074 TAGLN3Q9UI15 199 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 FBXO5Q9UKT4 447 aa19.89■□□□□ 0.77
CLIP3-206ENST00000593074 PEX11AO75192 247 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 ENO1P06733 434 aaKnown RBP19.88■□□□□ 0.77
CLIP3-206ENST00000593074 MYL4P12829 197 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 STMN1P16949 149 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 OR1E1P30953 314 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 IDH3AP50213 366 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 NEPROQ6NW34 567 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 ZNF354CQ86Y25 554 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 CEP97Q8IW35 865 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 STYXQ8WUJ0 223 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 CPSF2Q9P2I0 782 aaKnown RBP19.88■□□□□ 0.77
CLIP3-206ENST00000593074 APOBEC2Q9Y235 224 aaKnown RBP19.88■□□□□ 0.77
CLIP3-206ENST00000593074 PRAMEF11O60813 436 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 SAT1P21673 171 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 CRABP2P29373 138 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 PRKAA2P54646 552 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 LBRQ14739 615 aaKnown RBP19.88■□□□□ 0.77
CLIP3-206ENST00000593074 KCTD4Q8WVF5 259 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 RNPEPL1Q9HAU8 725 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 ACOT9Q9Y305 439 aa19.88■□□□□ 0.77
CLIP3-206ENST00000593074 MROH6A6NGR9 719 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 PRR5-ARHGAP8B1AHC4 643 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 TARM1B6A8C7 271 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 F5H5T6 163 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 HSPA4LO95757 839 aa19.87■□□□□ 0.77
CLIP3-206ENST00000593074 ATP5C1P36542 298 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms