RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 KIAA1161Q6NSJ0 714 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 GDPD4Q6W3E5 623 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 GCNT7Q6ZNI0 430 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 RFX8Q6ZV50 586 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 VPS36Q86VN1 386 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 OXR1Q8N573 874 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 IQCDQ96DY2 449 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 EXOC2Q96KP1 924 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 OSBPL1AQ9BXW6 950 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 XPO4Q9C0E2 1151 aaKnown RBP14.08□□□□□ -0.16
APOC1-208ENST00000592535 THAP2Q9H0W7 228 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 UBA2Q9UBT2 640 aaPredicted RBP14.08□□□□□ -0.16
APOC1-208ENST00000592535 FTSJ1Q9UET6 329 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 ITM2BQ9Y287 266 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 ARID1BQ8NFD5 2236 aaPredicted RBP14.08□□□□□ -0.16
APOC1-208ENST00000592535 FAM221BA6H8Z2 402 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 INSIG1O15503 277 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 DAPK3O43293 454 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 TNFSF14O43557 240 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 PRAMEF11O60813 436 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 DKK1O94907 266 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 TCF4P15884 667 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 IL1R2P27930 398 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 CASP14P31944 242 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 PCK1P35558 622 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 PAPOLAP51003 745 aaKnown RBP14.07□□□□□ -0.16
APOC1-208ENST00000592535 RPS21P63220 83 aaKnown RBP14.07□□□□□ -0.16
APOC1-208ENST00000592535 NFKBIBQ15653 356 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 LRRC73Q5JTD7 316 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 KANSL1Q7Z3B3 1105 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 PSTKQ8IV42 348 aaKnown RBP14.07□□□□□ -0.16
APOC1-208ENST00000592535 ARHGAP12Q8IWW6 846 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 EID2Q8N6I1 236 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 NPWQ8N729 165 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 OR13H1Q8NG92 308 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 RAB7BQ96AH8 199 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 FEM1CQ96JP0 617 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 SLC17A9Q9BYT1 436 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 DONSONQ9NYP3 566 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 CWC15Q9P013 229 aaKnown RBP14.07□□□□□ -0.16
APOC1-208ENST00000592535 MFHAS1Q9Y4C4 1052 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 CACNA1BQ00975 2339 aa14.07□□□□□ -0.16
APOC1-208ENST00000592535 SHROOM3Q8TF72 1996 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 IGLON5A6NGN9 336 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 ARHGAP42A6NI28 874 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 AREL1O15033 823 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 RAD51BO15315 384 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 TSPAN6O43657 245 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 SDC3O75056 442 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 PIGNO95427 931 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 PAK4O96013 591 aaPredicted RBP14.06□□□□□ -0.16
APOC1-208ENST00000592535 RAD51Q06609 339 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 ACAP1Q15027 740 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 CCDC157Q569K6 752 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 AFMIDQ63HM1 303 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 ABI3BPQ7Z7G0 1075 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 ARHGEF26Q96DR7 871 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 BTBD6Q96KE9 485 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 CNDP2Q96KP4 475 aaKnown RBP14.06□□□□□ -0.16
APOC1-208ENST00000592535 BMFQ96LC9 184 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 NCAPGQ9BPX3 1015 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 NUP85Q9BW27 656 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 CALN1Q9BXU9 219 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 CAAP1Q9H8G2 361 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 ZWILCHQ9H900 591 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 EPG5Q9HCE0 2579 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 CEP295Q9C0D2 2601 aa14.06□□□□□ -0.16
APOC1-208ENST00000592535 POM121BA6NF01 834 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 A6NNZ2 444 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 DFFAO00273 331 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 NEMP1O14524 444 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 ENC1O14682 589 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 KRT37O76014 449 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 LDOC1O95751 146 aaPredicted RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 CYP1A2P05177 515 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 ITIH2P19823 946 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 RGRP47804 291 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 HCAR3P49019 387 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 ZNF135P52742 658 aaPredicted RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 DPYSQ14117 519 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 PIGHQ14442 188 aaPredicted RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 DPYSL2Q16555 572 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 CCDC122Q5T0U0 273 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 TXNRD3NBQ6F5E7 133 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 ALKBH5Q6P6C2 394 aaKnown RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 ARHGAP36Q6ZRI8 547 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 Q6ZSR6 202 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 PTAR1Q7Z6K3 402 aaPredicted RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 TTC7BQ86TV6 843 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 ZSCAN30Q86W11 494 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 TP53INP2Q8IXH6 220 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 SLC22A18ASQ8N1D0 253 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 HSPH1Q92598 858 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 KLF6Q99612 283 aaPredicted RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 C1QTNF2Q9BXJ5 285 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 CPEB1Q9BZB8 566 aaKnown RBP14.05□□□□□ -0.16
APOC1-208ENST00000592535 SP110Q9HB58 689 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 KLHL11Q9NVR0 708 aa14.05□□□□□ -0.16
APOC1-208ENST00000592535 DKK3Q9UBP4 350 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms