RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ZNF143P52747 638 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-205ENST00000592333 COPB1P53618 953 aaKnown RBP19.15■□□□□ 0.66
CCDC43-205ENST00000592333 YPEL5P62699 121 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 MYL5Q02045 173 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 PTK2BQ14289 1009 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 GRM3Q14832 879 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 ACAP1Q15027 740 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 SOWAHCQ53LP3 525 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-205ENST00000592333 EFHC2Q5JST6 749 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 CDCP2Q5VXM1 449 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 ZCCHC8Q6NZY4 707 aaKnown RBP19.15■□□□□ 0.66
CCDC43-205ENST00000592333 LSMEM2Q8N112 164 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 CCDC185Q8N715 623 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 APOLD1Q96LR9 279 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 GDAP1L1Q96MZ0 367 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 PCDHB18PQ96TA0 734 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 C1QTNF7Q9BXJ2 289 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 TM6SF2Q9BZW4 377 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 TTYH3Q9C0H2 523 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 CATSPERBQ9H7T0 1116 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 DNAJC28Q9NX36 388 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 DKK3Q9UBP4 350 aa19.15■□□□□ 0.66
CCDC43-205ENST00000592333 TCRBV5S1A1TA0A578 114 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 EIF3CLB5ME19 914 aaKnown RBP19.14■□□□□ 0.65
CCDC43-205ENST00000592333 KRIT1O00522 736 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 NEMP1O14524 444 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 PFN3P60673 137 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 COL9A2Q14055 689 aaPredicted RBP19.14■□□□□ 0.65
CCDC43-205ENST00000592333 PARP15Q460N3 678 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 RAB6CQ53S08 254 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 SASS6Q6UVJ0 657 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 GDPD4Q6W3E5 623 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 MON1BQ7L1V2 547 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 RYBPQ8N488 228 aaPredicted RBP19.14■□□□□ 0.65
CCDC43-205ENST00000592333 FGF11Q92914 225 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 VOPP1Q96AW1 172 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 CENPTQ96BT3 561 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 VCPIP1Q96JH7 1222 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 EIF3CQ99613 913 aaKnown RBP19.14■□□□□ 0.65
CCDC43-205ENST00000592333 EPAS1Q99814 870 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 CPEB1Q9BZB8 566 aaKnown RBP19.14■□□□□ 0.65
CCDC43-205ENST00000592333 RAB6CQ9H0N0 254 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 IPO11Q9UI26 975 aaKnown RBP19.14■□□□□ 0.65
CCDC43-205ENST00000592333 SALL4Q9UJQ4 1053 aa19.14■□□□□ 0.65
CCDC43-205ENST00000592333 IGLON5A6NGN9 336 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 K7ESM1 405 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 RAD51BO15315 384 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 FGF10O15520 208 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-205ENST00000592333 EPHB2P29323 1055 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 SEMG2Q02383 582 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 TTC7BQ86TV6 843 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 UMODL1-AS1Q8N2C9 162 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 ZNF548Q8NEK5 533 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-205ENST00000592333 TPCN2Q8NHX9 752 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 PCMTD1Q96MG8 357 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-205ENST00000592333 GBP4Q96PP9 640 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 DEPDC7Q96QD5 511 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 AGPAT1Q99943 283 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 CNPY3Q9BT09 278 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 MYO6Q9UM54 1294 aa19.13■□□□□ 0.65
CCDC43-205ENST00000592333 BAHCC1Q9P281 2608 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 MYLKQ15746 1914 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 FFAR2O15552 330 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 BUB1O43683 1085 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 OPA1O60313 960 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 DXOO77932 396 aaKnown RBP19.12■□□□□ 0.65
CCDC43-205ENST00000592333 IGSF6O95976 241 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 UGT2B4P06133 528 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 FERP16591 822 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 ABL2P42684 1182 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 UBXN1Q04323 297 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 PDE1CQ14123 709 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-205ENST00000592333 STX1AQ16623 288 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 PPP1R15BQ5SWA1 713 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 DNAJC24Q6P3W2 148 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 LSM14AQ8ND56 463 aaKnown RBP19.12■□□□□ 0.65
CCDC43-205ENST00000592333 ZNF578Q96N58 590 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-205ENST00000592333 KLHL32Q96NJ5 620 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 NOL6Q9H6R4 1146 aaKnown RBP19.12■□□□□ 0.65
CCDC43-205ENST00000592333 ACTL7AQ9Y615 435 aa19.12■□□□□ 0.65
CCDC43-205ENST00000592333 TK2O00142 265 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 AQP9O43315 295 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 TLX3O43711 291 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-205ENST00000592333 TM7SF2O76062 418 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 TMCC1O94876 653 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 CDK11BP21127 795 aaKnown RBP19.11■□□□□ 0.65
CCDC43-205ENST00000592333 CLDN6P56747 220 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 ELP6Q0PNE2 266 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 SERINC3Q13530 473 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 TBC1D25Q3MII6 688 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 PHLDB2Q86SQ0 1253 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 WDR48Q8TAF3 677 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 DCBLD2Q96PD2 775 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 UBL7Q96S82 380 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-205ENST00000592333 ABCG4Q9H172 646 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 SPASTQ9UBP0 616 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 FZD10Q9ULW2 581 aa19.11■□□□□ 0.65
CCDC43-205ENST00000592333 LY6G6EA0A0G2JKS1 128 aa19.1■□□□□ 0.65
CCDC43-205ENST00000592333 FAM170AA1A519 330 aa19.1■□□□□ 0.65
CCDC43-205ENST00000592333 EME2A4GXA9 379 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms