RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ING2Q9H160 280 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 DHX33Q9H6R0 707 aaKnown RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 AASSQ9UDR5 926 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CAB39Q9Y376 341 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF541Q9H0D2 1346 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 LOC105371267A0A1B0GV96 52 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 TBX1O43435 398 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CRYZL1O95825 349 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ECT2LQ008S8 904 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF846Q147U1 533 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 SIGIRRQ6IA17 410 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 PPP4R4Q6NUP7 873 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 PLEKHG7Q6ZR37 379 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF534Q76KX8 674 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 BEND7Q8N7W2 519 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 TNIP2Q8NFZ5 429 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 FNIP1Q8TF40 1166 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 GRID2O43424 1007 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 ASNA1O43681 348 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CES1P23141 567 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 MYF6P23409 242 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 GRIA4P48058 902 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CCT8P50990 548 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 DGCR6Q14129 220 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 PIGHQ14442 188 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CMTR2Q8IYT2 770 aaKnown RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 POC5Q8NA72 575 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 GOLM1Q8NBJ4 401 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 OR13F1Q8NGS4 319 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 EFHD2Q96C19 240 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-228ENST00000590347 IRF2BPLQ9H1B7 796 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 HMG20AQ9NP66 347 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 GTSE1Q9NYZ3 720 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 SEPT3Q9UH03 358 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 GJA3Q9Y6H8 435 aa15.34■□□□□ 0.05
CIRBP-228ENST00000590347 CCDC162PA2VCL2 907 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 ARNTP27540 789 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 SHMT2P34897 504 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 VBP1P61758 197 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 GTF2BQ00403 316 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 CXCL9Q07325 125 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 ZNF460Q14592 562 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 C6orf10Q5SRN2 563 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 MOXD1Q6UVY6 613 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 DHFR2Q86XF0 187 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 TMEM126BQ8IUX1 230 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 DHRSXQ8N5I4 330 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 TMEM161BQ8NDZ6 487 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 ZBTB26Q9HCK0 441 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 CDYLQ9Y232 598 aa15.33■□□□□ 0.05
CIRBP-228ENST00000590347 HDAC3O15379 428 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 INMTO95050 263 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 PARNO95453 639 aaKnown RBP15.33■□□□□ 0.04
CIRBP-228ENST00000590347 CST3P01034 146 aaPredicted RBP15.33■□□□□ 0.04
CIRBP-228ENST00000590347 GTF2E2P29084 291 aaKnown RBP15.33■□□□□ 0.04
CIRBP-228ENST00000590347 SLC7A1P30825 629 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 RAP1GAPP47736 663 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 NT5C2P49902 561 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 HADHQ16836 314 aaKnown RBP15.33■□□□□ 0.04
CIRBP-228ENST00000590347 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 TBPL2Q6SJ96 375 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 CCDC103Q8IW40 242 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 GLMNQ92990 594 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 PTPRHQ9HD43 1115 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 MFHAS1Q9Y4C4 1052 aa15.33■□□□□ 0.04
CIRBP-228ENST00000590347 CHADO15335 359 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 SSX4O60224 188 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 HTR1BP28222 390 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 YWHABP31946 246 aaKnown RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 HNRNPFP52597 415 aaKnown RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 NDUFA5Q16718 116 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 KIZQ2M2Z5 673 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 CCSAPQ6IQ19 270 aaPredicted RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 SAMD7Q7Z3H4 446 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 DDIASQ8IXT1 998 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 ATP6V0D2Q8N8Y2 350 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 PBXIP1Q96AQ6 731 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 PNPLA8Q9NP80 782 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 GIMAP2Q9UG22 337 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 CNOT11Q9UKZ1 510 aaKnown RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 USP18Q9UMW8 372 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 LINC00854A0A1B0GVQ3 168 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 G3V2L1 256 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 ZNF701M0R085 212 aaPredicted RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 PCNAP12004 261 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 ATICP31939 592 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 POLD2P49005 469 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 ANKRD34AQ69YU3 496 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 CADM2Q8N3J6 435 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 IL31RAQ8NI17 732 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 TMC2Q8TDI7 906 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 OSCP1Q8WVF1 389 aa15.32■□□□□ 0.04
CIRBP-228ENST00000590347 PIWIL1Q96J94 861 aaKnown RBP15.32■□□□□ 0.04
CIRBP-228ENST00000590347 EMILIN2Q9BXX0 1053 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms