RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SCML1Q9UN30 329 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 NEU2Q9Y3R4 380 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 WASF2Q9Y6W5 498 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 WDFY4Q6ZS81 3184 aa12.21□□□□□ -0.46
APOC1-206ENST00000590334 CEP192Q8TEP8 1941 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 K7ESF4 209 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 RNASEH1O60930 286 aaKnown RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 SOCS5O75159 536 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 LEFTY1O75610 366 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 GJB3O75712 270 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 ADH1BP00325 375 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 TDGF1P13385 188 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 GABRG2P18507 467 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 NDUFV2P19404 249 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 NFKB1P19838 968 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 AVPR2P30518 371 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 RPS14P62263 151 aaKnown RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 DSC2Q02487 901 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 IHHQ14623 411 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 CST6Q15828 149 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 ZNF776Q68DI1 518 aaPredicted RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 ITPRIPL1Q6GPH6 555 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 PRPF39Q86UA1 669 aaKnown RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 C1orf210Q8IVY1 113 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 DTWD2Q8NBA8 298 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 OR6K2Q8NGY2 324 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 CCDC110Q8TBZ0 833 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 HCAR2Q8TDS4 363 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 GRK7Q8WTQ7 553 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 ZNF641Q96N77 438 aaPredicted RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 PPP1R2P1Q96PQ5 205 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 DDX47Q9H0S4 455 aaKnown RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 ZDHHC6Q9H6R6 413 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 ATP13A3Q9H7F0 1226 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 SPATA6Q9NWH7 488 aaPredicted RBP12.2□□□□□ -0.46
APOC1-206ENST00000590334 EBF1Q9UH73 591 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 SARDHQ9UL12 918 aa12.2□□□□□ -0.46
APOC1-206ENST00000590334 TCRBV21S2A2A0A5A6 115 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 TTC24A2A3L6 582 aaPredicted RBP12.19□□□□□ -0.46
APOC1-206ENST00000590334 FAM86C2PA6NEL3 165 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 C1QTNF3-AMACRE9PGA6 284 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 TRAFD1O14545 582 aaPredicted RBP12.19□□□□□ -0.46
APOC1-206ENST00000590334 HTRA2O43464 458 aaPredicted RBP12.19□□□□□ -0.46
APOC1-206ENST00000590334 BNIP3LO60238 219 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 ALDH1A2O94788 518 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 APBB3O95704 486 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 SERPINF2P08697 491 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 C5AR1P21730 350 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 SERPINA4P29622 427 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 GKP32189 559 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 PTGIRP43119 386 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 NUBP1P53384 320 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 SKOR1P84550 965 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 BCL2L1Q07817 233 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 ITKQ08881 620 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 PARP6Q2NL67 630 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 FAM182AQ5T1J6 154 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 FAM46CQ5VWP2 391 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 GDPD4Q6W3E5 623 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 TMPRSS6Q8IU80 811 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 MMAAQ8IVH4 418 aaKnown RBP12.19□□□□□ -0.46
APOC1-206ENST00000590334 MAML2Q8IZL2 1156 aaPredicted RBP12.19□□□□□ -0.46
APOC1-206ENST00000590334 RYBPQ8N488 228 aaPredicted RBP12.19□□□□□ -0.46
APOC1-206ENST00000590334 CCDC89Q8N998 374 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 GLIS1Q8NBF1 620 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 TSTD1Q8NFU3 115 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 FAM131CQ96AQ9 280 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 ECHDC3Q96DC8 303 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 GORASP1Q9BQQ3 440 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 C1QTNF1Q9BXJ1 281 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 SUV39H2Q9H5I1 410 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 PCDH9Q9HC56 1237 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 VPS45Q9NRW7 570 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 PAK5Q9P286 719 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 DKK3Q9UBP4 350 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 TTLL3Q9Y4R7 772 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 LRRK1Q38SD2 2015 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 MYLKQ15746 1914 aa12.19□□□□□ -0.46
APOC1-206ENST00000590334 FANCMQ8IYD8 2048 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 CCDC163A0A0D9SF12 145 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 A0A1W2PQ67 120 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 FZD6O60353 706 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 METTL18O95568 372 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 ECEL1O95672 775 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 GAS8O95995 478 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 IFNB1P01574 187 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 IL1BP01584 269 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 IGLV3-19P01714 112 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 ETS1P14921 441 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 ITGB7P26010 798 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 SLC8A1P32418 973 aa12.18□□□□□ -0.46
APOC1-206ENST00000590334 RPL22P35268 128 aaKnown RBP12.18□□□□□ -0.46
APOC1-206ENST00000590334 ACTN2P35609 894 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms