RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 HGSNATQ68CP4 663 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 KCTD16Q68DU8 428 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 DCUN1D2Q6PH85 259 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 Q6ZSR6 202 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 PTAR1Q7Z6K3 402 aaPredicted RBP17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 IQCHQ86VS3 1027 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 PROSER1Q86XN7 944 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 ARHGAP12Q8IWW6 846 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 SLC17A9Q9BYT1 436 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 SLC39A8Q9C0K1 460 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 TCEAL2Q9H3H9 227 aaPredicted RBP17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 DHX35Q9H5Z1 703 aaKnown RBP17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 AIPL1Q9NZN9 384 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 AP4E1Q9UPM8 1137 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 RAXQ9Y2V3 346 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 U3KQA8 63 aa17.09■□□□□ 0.33
CROCCP3-203ENST00000589964 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 TMEM8BA6NDV4 472 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 TRABD2BA6NFA1 517 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 WASH4PA8MWX3 477 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 AREL1O15033 823 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 MUSKO15146 869 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 BUB1BO60566 1050 aaPredicted RBP17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 TIMP2P16035 220 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 DGKAP23743 735 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 MIPP30301 263 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 AKT2P31751 481 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 IGFALSP35858 605 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 PRKCIP41743 596 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 ZNF805Q5CZA5 627 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 NEK5Q6P3R8 708 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 C19orf48Q6RUI8 117 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 ZNF354CQ86Y25 554 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 UMODL1-AS1Q8N2C9 162 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 CRELD1Q96HD1 420 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 BTBD6Q96KE9 485 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 C1QTNF2Q9BXJ5 285 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 MBNL1Q9NR56 388 aaKnown RBP17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 ETNK2Q9NVF9 386 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 MYO1AQ9UBC5 1043 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 KNTC1P50748 2209 aa17.08■□□□□ 0.32
CROCCP3-203ENST00000589964 LAMA5O15230 3695 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 A0A1W2PQC6 194 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 AP1G1O43747 822 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 MMP20O60882 483 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 LRCH4O75427 683 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 PIAS2O75928 621 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 ETFBP38117 255 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 ARRB1P49407 418 aaPredicted RBP17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 TPI1P60174 286 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 FANCCQ00597 558 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 CYP4F3Q08477 520 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 SLC45A4Q5BKX6 768 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 RBFAQ8N0V3 343 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 SKA1Q96BD8 255 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 ZNF653Q96CK0 615 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 PPP1R16AQ96I34 528 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 WRAP53Q9BUR4 548 aaKnown RBP17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 KLHL11Q9NVR0 708 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 CNOT8Q9UFF9 292 aaKnown RBP17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 MYO6Q9UM54 1294 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 LRRK1Q38SD2 2015 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 CACNA1GO43497 2377 aa17.07■□□□□ 0.32
CROCCP3-203ENST00000589964 PAPOLAP51003 745 aaKnown RBP17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 RHOAP61586 193 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 RPS21P63220 83 aaKnown RBP17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 KLHL30Q0D2K2 578 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 EIF2B5Q13144 721 aaKnown RBP17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 TCEA2Q15560 299 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 SMTNL2Q2TAL5 461 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 HES3Q5TGS1 186 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 AFMIDQ63HM1 303 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 KYAT3Q6YP21 454 aaKnown RBP17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 VPS36Q86VN1 386 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 PLPP6Q8IY26 295 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 ARHGEF26Q96DR7 871 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 GDAP1L1Q96MZ0 367 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 EPAS1Q99814 870 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 TMEM51Q9NW97 253 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 DNAJC28Q9NX36 388 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 TPX2Q9ULW0 747 aaKnown RBP17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 MYLKQ15746 1914 aa17.06■□□□□ 0.32
CROCCP3-203ENST00000589964 A6NNZ2 444 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 SMTNL1A8MU46 457 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 SCAMP1O15126 338 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 PRAMEF11O60813 436 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 RFPL3O75679 317 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 POP4O95707 220 aaKnown RBP17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 CELA2BP08218 269 aaPredicted RBP17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 ERCC2P18074 760 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 NUDT1P36639 197 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 SNRPD1P62314 119 aaKnown RBP17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 OVGP1Q12889 678 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 PTPRRQ15256 657 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 INAVAQ3KP66 663 aa17.05■□□□□ 0.32
CROCCP3-203ENST00000589964 KIAA1161Q6NSJ0 714 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms