RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 NCEH1Q6PIU2 408 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 PID1Q7Z2X4 250 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 HDDC3Q8N4P3 179 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 CHST14Q8NCH0 376 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 CADM4Q8NFZ8 388 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 SLC35B2Q8TB61 432 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 GANCQ8TET4 914 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 GAB3Q8WWW8 586 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 SPOCK2Q92563 424 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 NKD2Q969F2 451 aaPredicted RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 WDR24Q96S15 920 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 BTBD1Q9H0C5 482 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 SLC25A51Q9H1U9 297 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 MTG2Q9H4K7 406 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ZDHHC6Q9H6R6 413 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 NOD2Q9HC29 1040 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 VPS45Q9NRW7 570 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 POLR3BQ9NW08 1133 aaPredicted RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 FBXL12Q9NXK8 326 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 EVLQ9UI08 416 aaPredicted RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ZNF148Q9UQR1 794 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 AAR2Q9Y312 384 aaKnown RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ACTL7AQ9Y615 435 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 GOLGA6CA6NDK9 693 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 LRRC72A6NJI9 287 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RNF103O00237 685 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 MID1O15344 667 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 KCNN4O15554 427 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 MAP3K13O43283 966 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 AP1G1O43747 822 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 OPHN1O60890 802 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 LILRB5O75023 590 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 NDUFS2O75306 463 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 GCATO75600 419 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RPP40O75818 363 aaKnown RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RHOBTB1O94844 696 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 EPOP01588 193 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 GOLGA6DP0CG33 693 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 PTPN3P26045 913 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RBL1P28749 1068 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 CD6P30203 668 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 NUDT1P36639 197 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 PSMD8P48556 350 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 FNTBP49356 437 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 TPMTP51580 245 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 NEK3P51956 506 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RPL26P61254 145 aaKnown RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 PRPSAP1Q14558 356 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 ATXN7L2Q5T6C5 722 aaPredicted RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 FBXL19Q6PCT2 694 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 TSSK4Q6SA08 328 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 SYT10Q6XYQ8 523 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 ERN2Q76MJ5 926 aaKnown RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 TTC7BQ86TV6 843 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 CNTD1Q8N815 330 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 ATL2Q8NHH9 583 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 FOXJ1Q92949 421 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 FAM131CQ96AQ9 280 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RTP4Q96DX8 246 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RUNDC3BQ96NL0 473 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 AGAP3Q96P47 875 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 SRPK1Q96SB4 655 aaKnown RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 SEMA3CQ99985 751 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 HERPUD2Q9BSE4 406 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 ADGRE3Q9BY15 652 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 USP29Q9HBJ7 922 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 GLOD4Q9HC38 313 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 SEPT10Q9P0V9 454 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 KLHL8Q9P2G9 620 aaPredicted RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 SARDHQ9UL12 918 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 RPL26L1Q9UNX3 145 aaKnown RBP9.17□□□□□ -0.94
CIRBP-218ENST00000588344 WASF2Q9Y6W5 498 aa9.17□□□□□ -0.94
CIRBP-218ENST00000588344 TCRBV7S2A1N4TA0A589 114 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 C16orf96A6NNT2 1141 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 MUSKO15146 869 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 PSMD3O43242 534 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
CIRBP-218ENST00000588344 TSPAN6O43657 245 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 RNASEH2AO75792 299 aaKnown RBP9.16□□□□□ -0.94
CIRBP-218ENST00000588344 ANXA9O76027 345 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 HLA-DQB2P05538 268 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 UGT2B4P06133 528 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 CTSLP07711 333 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
CIRBP-218ENST00000588344 DPP6P42658 865 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 PXNP49023 591 aaPredicted RBP9.16□□□□□ -0.94
CIRBP-218ENST00000588344 ELP6Q0PNE2 266 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 WASHC5Q12768 1159 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 ZBTB17Q13105 803 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 OASLQ15646 514 aaKnown RBP9.16□□□□□ -0.94
CIRBP-218ENST00000588344 ELF2Q15723 593 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 CYP1B1Q16678 543 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 PARP6Q2NL67 630 aa9.16□□□□□ -0.94
CIRBP-218ENST00000588344 P3H1Q32P28 736 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms